RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CACHD1Q5VU97 1274 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 HLA-DQA1Q5Y7H0 255 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TRNP1Q6NT89 227 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 MTFR2Q6P444 385 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CYP2R1Q6VVX0 501 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TMEM26Q6ZUK4 368 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 Q6ZVL8 140 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 MARK2Q7KZI7 788 aaKnown RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 HSD11B1LQ7Z5J1 315 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TECPR1Q7Z6L1 1165 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CUZD1Q86UP6 607 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 FJX1Q86VR8 437 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 PPIL6Q8IXY8 311 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 NXPE1Q8N323 547 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF808Q8N4W9 903 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ZBTB2Q8N680 514 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 SIDT2Q8NBJ9 832 aaKnown RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 TMEM35BQ8NCS4 154 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 NUP43Q8NFH3 380 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 OR8K5Q8NH50 307 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 COG1Q8WTW3 980 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 FAR1Q8WVX9 515 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ITLN2Q8WWU7 325 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 SHC3Q92529 594 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 MR1Q95460 341 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 NTAN1Q96AB6 310 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 C1orf159Q96HA4 380 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CCDC34Q96HJ3 373 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 MRFAP1L1Q96HT8 127 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 COX14Q96I36 57 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 LRFN5Q96NI6 719 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 NLNQ9BYT8 704 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 RAB33BQ9H082 229 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 CHST8Q9H2A9 424 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 RMI1Q9H9A7 625 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 WASH6PQ9NQA3 447 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 GOLGA6AQ9NYA3 693 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 VPS18Q9P253 973 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 FBLN5Q9UBX5 448 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 EPHA6Q9UF33 1036 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 SNX7Q9UNH6 387 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-214ENST00000540865 JMJD1CQ15652 2540 aa4.51□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF106Q9H2Y7 1883 aaKnown RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ACANP16112 2415 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 A0A1W2PQJ5 194 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 C7orf72A4D263 438 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 TRIM49BA6NDI0 452 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 J3KR12 359 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PSMA7O14818 248 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KCNN4O15554 427 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 HTRA2O43464 458 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SNX2O60749 519 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 DNAJC6O75061 913 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SOCS5O75159 536 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SCRG1O75711 98 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PALMO75781 387 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 NADKO95544 446 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ASMTLO95671 621 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GNA14O95837 355 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CPP00450 1065 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 VIPP01282 170 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 JCHAINP01591 159 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KLK3P07288 261 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ZSCAN22P10073 491 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CD99P14209 185 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FOLR1P15328 257 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 LHCGRP22888 699 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SDC4P31431 198 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CAPZBP47756 277 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 RENBPP51606 427 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SOX8P57073 446 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 BPIFB4P59827 614 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KRTAP10-9P60411 292 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 MVKQ03426 396 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PAK1Q13153 545 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GPS2Q13227 327 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 RAPSNQ13702 412 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 RFTN1Q14699 578 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 LLGL1Q15334 1064 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KYNUQ16719 465 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CCDC14Q49A88 953 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 ANO6Q4KMQ2 910 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 SLC35F1Q5T1Q4 408 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 DENND2CQ68D51 928 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FCRL6Q6DN72 434 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GALNT18Q6P9A2 607 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 GJB7Q6PEY0 223 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 RPTNQ6XPR3 784 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 FAM92BQ6ZTR7 304 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 CHST15Q7LFX5 561 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-214ENST00000540865 STRADAQ7RTN6 431 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 MRGPRGQ86SM5 289 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PHLDB2Q86SQ0 1253 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 TRIM74Q86UV6 250 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 KMT5CQ86Y97 462 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 RAB43Q86YS6 212 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 PHYKPLQ8IUZ5 450 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 TRIM48Q8IWZ4 208 aa4.5□□□□□ -1.69
SNHG1-214ENST00000540865 RBM12BQ8IXT5 1001 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms