RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ANKS6Q68DC2 871 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 CCDC121Q6ZUS5 278 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 ERMP1Q7Z2K6 904 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 RASGRP3Q8IV61 690 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 VRK3Q8IV63 474 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 ZNF547Q8IVP9 402 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 ASB11Q8WXH4 323 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 KLK6Q92876 244 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 IER2Q9BTL4 223 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 LGR4Q9BXB1 951 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 TMEM120AQ9BXJ8 343 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 SLC12A9Q9BXP2 914 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 ACTR5Q9H9F9 607 aaPredicted RBP13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 ACSS2Q9NR19 701 aa13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 ZFC3H1O60293 1989 aaKnown RBP13.95□□□□□ -0.18
CYB561A3-216ENST00000540755 NCF1BA6NI72 391 aaPredicted RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 NCF1CA8MVU1 366 aaPredicted RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 SLCO1B7G3V0H7 640 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 GFYI3L273 518 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 NCF1P14598 390 aaPredicted RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 MPSTP25325 297 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 EEF1DP29692 281 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 AQP5P55064 265 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 PHKG1Q16816 387 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 SPDYAQ5MJ70 313 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 CUZD1Q86UP6 607 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 SLC22A15Q8IZD6 547 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 TSTD1Q8NFU3 115 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 HM13Q8TCT9 377 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 UBTD2Q8WUN7 234 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 DLG3Q92796 817 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 COG4Q9H9E3 785 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 DNAJC28Q9NX36 388 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 UTP6Q9NYH9 597 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 GULP1Q9UBP9 304 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 TMEM98Q9Y2Y6 226 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 OR1A2Q9Y585 309 aa13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 TNPO3Q9Y5L0 923 aaKnown RBP13.94□□□□□ -0.18
CYB561A3-216ENST00000540755 KLHL33A6NCF5 533 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 CCT8L1PA6NM43 557 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 ZNF195O14628 629 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 DCTN3O75935 186 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 MATN4O95460 622 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 SEMA4FO95754 770 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 HOXC4P09017 264 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 CYP2A7P20853 494 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 OXTRP30559 389 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 ARHGAP8P85298 464 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 IFT88Q13099 833 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 SULT1C3Q6IMI6 304 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 METTL2BQ6P1Q9 378 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 UBE2R2Q712K3 238 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 C11orf96Q7Z7L8 435 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 LRRTM4Q86VH4 590 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 OXR1Q8N573 874 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 OR2L2Q8NH16 312 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 ZNF483Q8TF39 744 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 STON2Q8WXE9 905 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 TRIM54Q9BYV2 358 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 WWP1Q9H0M0 922 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 RMI1Q9H9A7 625 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PARVBQ9HBI1 364 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 C2orf42Q9NWW7 574 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 VTI1BQ9UEU0 232 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 ZDHHC2Q9UIJ5 367 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PTBP2Q9UKA9 531 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PDE10AQ9Y233 779 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 MATN2O00339 956 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 SLC31A1O15431 190 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 GRID2O43424 1007 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 LATO43561 262 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PSIP1O75475 530 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 POP7O75817 140 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 ANXA5P08758 320 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 HIST1H2AGP0C0S8 130 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 HIST1H2ADP20671 130 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 HNRNPA2B1P22626 353 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 PBLDP30039 288 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 RPIAP49247 311 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 AP1S2P56377 157 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 CLCQ05315 142 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 ANO7Q6IWH7 933 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 DOK6Q6PKX4 331 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 CRTC3Q6UUV7 619 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 XKR5Q6UX68 686 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 RPS27LQ71UM5 84 aaKnown RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 AFAP1L2Q8N4X5 818 aa13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 LILRA3Q8N6C8 439 aaPredicted RBP13.93□□□□□ -0.18
CYB561A3-216ENST00000540755 SKA2Q8WVK7 121 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms