RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 OPTCQ9UBM4 332 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 RGS13O14921 159 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 CYP7B1O75881 506 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 DIRAS1O95057 198 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 NPPAP01160 153 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 IL18R1Q13478 541 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 AP5B1Q2VPB7 878 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 CCDC58Q4VC31 144 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 PARP16Q8N5Y8 322 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 TTC29Q8NA56 475 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 PJA1Q8NG27 643 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 KCTD13Q8WZ19 329 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 NUSAP1Q9BXS6 441 aaKnown RBP12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 ITPAQ9BY32 194 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 TFB2MQ9H5Q4 396 aaKnown RBP12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 RPRD1BQ9NQG5 326 aaKnown RBP12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 TAS2R13Q9NYV9 303 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 CACNG4Q9UBN1 327 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 PNMA8CA0A1B0GUJ8 204 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 LOC110117498-PIK3R3F6TDL0 507 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 KERAO60938 352 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 NDUFS3O75489 264 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 DNTTP04053 509 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 LILRA4P59901 499 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 SLC35A2P78381 396 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 MVKQ03426 396 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 DDR2Q16832 855 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 FAM174BQ3ZCQ3 159 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 MARC1Q5VT66 337 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 TTC23LQ6PF05 361 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 DLEU7Q6UYE1 221 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 SLC13A3Q8WWT9 602 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 REXO5Q96IC2 774 aaKnown RBP12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 ATOH8Q96SQ7 321 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 CHCHD6Q9BRQ6 235 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 ZFP14Q9HCL3 533 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 RAPGEFL1Q9UHV5 662 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 ZMYM5Q9UJ78 669 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
SFSWAP-209ENST00000540469 KRT87PA6NCN2 255 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 FDXRP22570 491 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 GADD45AP24522 165 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 HUNKP57058 714 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 GNG2P59768 71 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 TUBA1BP68363 451 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 SLC14A2Q15849 920 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 TUBA1AQ71U36 451 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 GDPD3Q7L5L3 318 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 ZDHHC21Q8IVQ6 265 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 SLC38A4Q969I6 547 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 ANKHQ9HCJ1 492 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 SATB2Q9UPW6 733 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 RNF6Q9Y252 685 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 EIF3LQ9Y262 564 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 TSPAN3O60637 253 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PAGE1O75459 146 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 FKBP9O95302 570 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 CAPN1P07384 714 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 CTSKP43235 329 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 ZNF549Q6P9A3 640 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PAQR9Q6ZVX9 377 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PEX5LQ8IYB4 626 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 TRIM63Q969Q1 353 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 FCRL2Q96LA5 508 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 COQ7Q99807 217 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 BBS2Q9BXC9 721 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 DPY30Q9C005 99 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 BRINP2Q9C0B6 783 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 SLC25A51Q9H1U9 297 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PKP3Q9Y446 797 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 ARL5AQ9Y689 179 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PSME4Q14997 1843 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 HAT1O14929 419 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 SCELO95171 688 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 RENBPP51606 427 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 ZNF45Q02386 682 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 FOXD4Q12950 439 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PON2Q15165 354 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 TIGD6Q17RP2 521 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 CES5AQ6NT32 575 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PNCKQ6P2M8 343 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 TUBA3EQ6PEY2 450 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 LBX2Q6XYB7 198 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 OR13C4Q8NGS5 318 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 CLHC1Q8NHS4 586 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
SFSWAP-209ENST00000540469 SMOQ99835 787 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms