RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 LAPTM5Q13571 262 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ARHGEF7Q14155 803 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 FAM174BQ3ZCQ3 159 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 SLC36A3Q495N2 470 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 SPRED1Q7Z699 444 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LIX1Q8N485 282 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 ZBTB2Q8N680 514 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 MFSD2AQ8NA29 543 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 FBXO30Q8TB52 745 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 CGREF1Q99674 301 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 MRPL17Q9NRX2 175 aaKnown RBP11.3□□□□□ -0.6
C11orf54-214ENST00000540113 CFAP97Q9P2B7 532 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 GNPTGQ9UJJ9 305 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 CCL27Q9Y4X3 112 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 FADS3Q9Y5Q0 445 aa11.3□□□□□ -0.6
C11orf54-214ENST00000540113 TYW5A2RUC4 315 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 OTCP00480 354 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ENO2P09104 434 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 TCF3P15923 654 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 MYF6P23409 242 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ACRV1P26436 265 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ALDH3B2P48448 385 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CTBSQ01459 385 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 GRIK2Q13002 908 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CDKN3Q16667 212 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 LPCAT2Q7L5N7 544 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SNX20Q7Z614 316 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 PHACTR4Q8IZ21 702 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SLC22A15Q8IZD6 547 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 RBFAQ8N0V3 343 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 OR10Q1Q8NGQ4 319 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 OR10A6Q8NH74 314 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 TSPEARQ8WU66 669 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 NSMCE2Q96MF7 247 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 OPTCQ9UBM4 332 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 FAM8A1Q9UBU6 413 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 EBF1Q9UH73 591 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 RSL24D1Q9UHA3 163 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CD84Q9UIB8 345 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 INTS6Q9UL03 887 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ZNF490Q9ULM2 529 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 PADI4Q9UM07 663 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SLC8A2Q9UPR5 921 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 PCDHB1Q9Y5F3 818 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 B4GAT1O43505 415 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 TGM5O43548 720 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SEC22BO75396 215 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 LDLRP01130 860 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CKMP06732 381 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ITGALP20701 1170 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 HTR1EP28566 365 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 RPS9P46781 194 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 NEK2P51955 445 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 WDR5P61964 334 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CPSF6Q16630 551 aaKnown RBP eCLIP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CYBRD1Q53TN4 286 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SPANXN4Q5MJ08 99 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 TMTC4Q5T4D3 741 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SUSD1Q6UWL2 747 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ITIH5Q86UX2 942 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 HS3ST5Q8IZT8 346 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 RNF175Q8N4F7 328 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 PDPRQ8NCN5 879 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 SKA2Q8WVK7 121 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 RHBDF1Q96CC6 855 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 AURKBQ96GD4 344 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 PDLIM5Q96HC4 596 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 ZNF583Q96ND8 569 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 THUMPD3Q9BV44 507 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 C2orf49Q9BVC5 232 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 CD244Q9BZW8 370 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 NTN4Q9HB63 628 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 OARD1Q9Y530 152 aa11.29□□□□□ -0.6
C11orf54-214ENST00000540113 TNPO3Q9Y5L0 923 aaKnown RBP11.29□□□□□ -0.6
C11orf54-214ENST00000540113 KANSL1LA0AUZ9 987 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 MTX2O75431 263 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 TRMUO75648 421 aaKnown RBP11.28□□□□□ -0.6
C11orf54-214ENST00000540113 GLUD1P00367 558 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 C1QCP02747 245 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 GSNP06396 782 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 DGKAP23743 735 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 RGS4P49798 205 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 NKG7Q16617 165 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 GPRC6AQ5T6X5 926 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 IRAK1BP1Q5VVH5 260 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CERS6Q6ZMG9 384 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 HTR3DQ70Z44 454 aa11.28□□□□□ -0.6
C11orf54-214ENST00000540113 CLVS1Q8IUQ0 354 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms