RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
DDB1-216ENST00000539739 EP300Q09472 2414 aaPredicted RBP15.09■□□□□ 0.01
DDB1-216ENST00000539739 B4DGG1 531 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 CDX4O14627 284 aaPredicted RBP15.09■□□□□ 0.01
DDB1-216ENST00000539739 PHGDHO43175 533 aaKnown RBP15.09■□□□□ 0.01
DDB1-216ENST00000539739 MT-ND3P03897 115 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 KRT15P19012 456 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 ZNF844Q08AG5 666 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 GBX1Q14549 363 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 ACSBG2Q5FVE4 666 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 KANSL1Q7Z3B3 1105 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 CMC1Q7Z7K0 106 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 CPNE9Q8IYJ1 553 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 CABS1Q96KC9 395 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 WWP1Q9H0M0 922 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 OR52A5Q9H2C5 316 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 CDYLQ9Y232 598 aa15.09■□□□□ 0.01
DDB1-216ENST00000539739 KIR2DS5A0A0G2JLQ3 304 aa15.08■□□□□ 0
DDB1-216ENST00000539739 A0A0G2JNG1 304 aa15.08■□□□□ 0
DDB1-216ENST00000539739 GOLGA6L10A6NI86 522 aa15.08■□□□□ 0
DDB1-216ENST00000539739 KIR2DS3K7RE56 304 aa15.08■□□□□ 0
DDB1-216ENST00000539739 ALDOAP04075 364 aaKnown RBP15.08■□□□□ 0
DDB1-216ENST00000539739 MPOP05164 745 aa15.08■□□□□ 0
DDB1-216ENST00000539739 ZNF37AP17032 561 aaPredicted RBP15.08■□□□□ 0
DDB1-216ENST00000539739 PGGT1BP53609 377 aa15.08■□□□□ 0
DDB1-216ENST00000539739 ZNF460Q14592 562 aa15.08■□□□□ 0
DDB1-216ENST00000539739 KIR2DS5Q14953 304 aa15.08■□□□□ 0
DDB1-216ENST00000539739 C6orf132Q5T0Z8 1188 aa15.08■□□□□ 0
DDB1-216ENST00000539739 IYDQ6PHW0 289 aa15.08■□□□□ 0
DDB1-216ENST00000539739 XKR5Q6UX68 686 aa15.08■□□□□ 0
DDB1-216ENST00000539739 NEK10Q6ZWH5 1172 aa15.08■□□□□ 0
DDB1-216ENST00000539739 TBC1D1Q86TI0 1168 aaPredicted RBP15.08■□□□□ 0
DDB1-216ENST00000539739 PDZD3Q86UT5 571 aa15.08■□□□□ 0
DDB1-216ENST00000539739 VRK3Q8IV63 474 aa15.08■□□□□ 0
DDB1-216ENST00000539739 MYO1HQ8N1T3 1032 aa15.08■□□□□ 0
DDB1-216ENST00000539739 EEF1AKMT1Q8WVE0 214 aa15.08■□□□□ 0
DDB1-216ENST00000539739 ISL2Q96A47 359 aa15.08■□□□□ 0
DDB1-216ENST00000539739 LINGO1Q96FE5 620 aa15.08■□□□□ 0
DDB1-216ENST00000539739 C12orf66Q96MD2 445 aa15.08■□□□□ 0
DDB1-216ENST00000539739 RXFP3Q9NSD7 469 aa15.08■□□□□ 0
DDB1-216ENST00000539739 EURLQ9NYK6 297 aa15.08■□□□□ 0
DDB1-216ENST00000539739 LGALS13Q9UHV8 139 aa15.08■□□□□ 0
DDB1-216ENST00000539739 WDR37Q9Y2I8 494 aa15.08■□□□□ 0
DDB1-216ENST00000539739 ACOT9Q9Y305 439 aa15.08■□□□□ 0
DDB1-216ENST00000539739 HEBP2Q9Y5Z4 205 aa15.08■□□□□ 0
DDB1-216ENST00000539739 ZFHX2Q9C0A1 2572 aaPredicted RBP15.07■□□□□ 0
DDB1-216ENST00000539739 A0A087X1B8 175 aa15.07■□□□□ 0
DDB1-216ENST00000539739 A0A096LPK6 155 aa15.07■□□□□ 0
DDB1-216ENST00000539739 A6NCN8 305 aa15.07■□□□□ 0
DDB1-216ENST00000539739 MAP2K7O14733 419 aa15.07■□□□□ 0
DDB1-216ENST00000539739 RGS16O15492 202 aaPredicted RBP15.07■□□□□ 0
DDB1-216ENST00000539739 FLRT2O43155 660 aa15.07■□□□□ 0
DDB1-216ENST00000539739 C2P06681 752 aa15.07■□□□□ 0
DDB1-216ENST00000539739 MPC1LP0DKB6 136 aa15.07■□□□□ 0
DDB1-216ENST00000539739 SLC26A3P40879 764 aa15.07■□□□□ 0
DDB1-216ENST00000539739 GRK6P43250 576 aa15.07■□□□□ 0
DDB1-216ENST00000539739 MAPK9P45984 424 aa15.07■□□□□ 0
DDB1-216ENST00000539739 ABRQ12979 859 aa15.07■□□□□ 0
DDB1-216ENST00000539739 CLCA4Q14CN2 919 aa15.07■□□□□ 0
DDB1-216ENST00000539739 CAPRIN2Q6IMN6 1127 aaKnown RBP15.07■□□□□ 0
DDB1-216ENST00000539739 OGFOD3Q6PK18 319 aa15.07■□□□□ 0
DDB1-216ENST00000539739 AVL9Q8NBF6 648 aa15.07■□□□□ 0
DDB1-216ENST00000539739 OR4C6Q8NH72 309 aa15.07■□□□□ 0
DDB1-216ENST00000539739 TFGQ92734 400 aaPredicted RBP15.07■□□□□ 0
DDB1-216ENST00000539739 CXorf40BQ96DE9 158 aa15.07■□□□□ 0
DDB1-216ENST00000539739 VPS11Q9H270 941 aa15.07■□□□□ 0
DDB1-216ENST00000539739 VIPAS39Q9H9C1 493 aa15.07■□□□□ 0
DDB1-216ENST00000539739 SIRPGQ9P1W8 387 aa15.07■□□□□ 0
DDB1-216ENST00000539739 TSR3Q9UJK0 312 aaKnown RBP15.07■□□□□ 0
DDB1-216ENST00000539739 C4orf47A7E2U8 309 aa15.06■□□□□ 0
DDB1-216ENST00000539739 EML2O95834 649 aa15.06■□□□□ 0
DDB1-216ENST00000539739 RPN2P04844 631 aa15.06■□□□□ 0
DDB1-216ENST00000539739 MYZAPP0CAP1 466 aa15.06■□□□□ 0
DDB1-216ENST00000539739 SLC35E2BP0CK96 405 aa15.06■□□□□ 0
DDB1-216ENST00000539739 CCDC166P0CW27 439 aa15.06■□□□□ 0
DDB1-216ENST00000539739 BRAFP15056 766 aa15.06■□□□□ 0
DDB1-216ENST00000539739 MAGEA12P43365 314 aa15.06■□□□□ 0
DDB1-216ENST00000539739 KRT33BQ14525 404 aa15.06■□□□□ 0
DDB1-216ENST00000539739 RPE65Q16518 533 aa15.06■□□□□ 0
DDB1-216ENST00000539739 ZCCHC8Q6NZY4 707 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 TMEM207Q6UWW9 146 aa15.06■□□□□ 0
DDB1-216ENST00000539739 DBX2Q6ZNG2 339 aa15.06■□□□□ 0
DDB1-216ENST00000539739 SLC9B2Q86UD5 537 aa15.06■□□□□ 0
DDB1-216ENST00000539739 TRIM48Q8IWZ4 208 aa15.06■□□□□ 0
DDB1-216ENST00000539739 CYP4X1Q8N118 509 aa15.06■□□□□ 0
DDB1-216ENST00000539739 NAGSQ8N159 534 aa15.06■□□□□ 0
DDB1-216ENST00000539739 ARL10Q8N8L6 244 aa15.06■□□□□ 0
DDB1-216ENST00000539739 SPDYE1Q8NFV5 336 aaPredicted RBP15.06■□□□□ 0
DDB1-216ENST00000539739 CFAP61Q8NHU2 1237 aa15.06■□□□□ 0
DDB1-216ENST00000539739 MAPK15Q8TD08 544 aa15.06■□□□□ 0
DDB1-216ENST00000539739 ACMSDQ8TDX5 336 aa15.06■□□□□ 0
DDB1-216ENST00000539739 PDLIM5Q96HC4 596 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 RMDN2Q96LZ7 410 aa15.06■□□□□ 0
DDB1-216ENST00000539739 TSNARE1Q96NA8 513 aa15.06■□□□□ 0
DDB1-216ENST00000539739 INSM2Q96T92 566 aaPredicted RBP15.06■□□□□ 0
DDB1-216ENST00000539739 CENPHQ9H3R5 247 aa15.06■□□□□ 0
DDB1-216ENST00000539739 STN1Q9H668 368 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 IMP3Q9NV31 184 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 CPSF2Q9P2I0 782 aaKnown RBP15.06■□□□□ 0
DDB1-216ENST00000539739 COLEC10Q9Y6Z7 277 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms