RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ANKRD60Q9BZ19 345 aa17.57■□□□□ 0.4
GNE-204ENST00000539208 ZDHHC6Q9H6R6 413 aa17.57■□□□□ 0.4
GNE-204ENST00000539208 CCL26Q9Y258 94 aa17.57■□□□□ 0.4
GNE-204ENST00000539208 PCDHB3Q9Y5E6 796 aa17.57■□□□□ 0.4
GNE-204ENST00000539208 AK5Q9Y6K8 562 aa17.57■□□□□ 0.4
GNE-204ENST00000539208 TRIM43BA6NCK2 446 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 WASH3PC4AMC7 463 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SOCS2O14508 198 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 INPP4BO15327 924 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SLC2A4P14672 509 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 AOAHP28039 575 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 OXTRP30559 389 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 CCR7P32248 378 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SPINT3P49223 89 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 APOFQ13790 326 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 DMC1Q14565 340 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 ADRM1Q16186 407 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SLC30A9Q6PML9 568 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 IFNEQ86WN2 208 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 GLB1L3Q8NCI6 653 aaPredicted RBP17.56■□□□□ 0.4
GNE-204ENST00000539208 ZFAND2BQ8WV99 257 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 TRIM43Q96BQ3 446 aaPredicted RBP17.56■□□□□ 0.4
GNE-204ENST00000539208 HBEGFQ99075 208 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 C9orf16Q9BUW7 83 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 DUS2Q9NX74 493 aaKnown RBP17.56■□□□□ 0.4
GNE-204ENST00000539208 IRAK3Q9Y616 596 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 ENO4A6NNW6 628 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 MANBAO00462 879 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 C1SP09871 688 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 C7P10643 843 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 MTHFD1P11586 935 aaKnown RBP17.56■□□□□ 0.4
GNE-204ENST00000539208 GNPDA1P46926 289 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 RPIAP49247 311 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 CCT8P50990 548 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SEMG2Q02383 582 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 IYDQ6PHW0 289 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SATL1Q86VE3 508 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 TBC1D21Q8IYX1 336 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 TCAIMQ8N3R3 496 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 KLHL23Q8NBE8 558 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 OR8J3Q8NGG0 315 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SLC22A17Q8WUG5 538 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 CLP1Q92989 425 aaKnown RBP17.56■□□□□ 0.4
GNE-204ENST00000539208 ZBTB18Q99592 522 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 CGREF1Q99674 301 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SLC32A1Q9H598 525 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 ANAPC2Q9UJX6 822 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 SLC4A7Q9Y6M7 1214 aa17.56■□□□□ 0.4
GNE-204ENST00000539208 LOC730098B7Z3J9 87 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 KIAA0355O15063 1070 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 CCL16O15467 120 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 NUAK1O60285 661 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 RSL1D1O76021 490 aaKnown RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 PGM3O95394 542 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 UGT2B4P06133 528 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 C8GP07360 202 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 PABPC1P11940 636 aaKnown RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 HTRA4P83105 476 aaPredicted RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 ARHGEF7Q14155 803 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 LRRC26Q2I0M4 334 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 SPRED1Q7Z699 444 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 TFAP2CQ92754 450 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 PRPF18Q99633 342 aaKnown RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 B4GALT6Q9UBX8 382 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 KLQ9UEF7 1012 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 SLCO3A1Q9UIG8 710 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 MAGEL2Q9UJ55 1249 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 ZNF490Q9ULM2 529 aaPredicted RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 BNIP3LO60238 219 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 CLDN9O95484 217 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 MPC1LP0DKB6 136 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 ACRP10323 421 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 HRH2P25021 359 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 GSTT1P30711 240 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 RPL38P63173 70 aaKnown RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 ATP6AP1Q15904 470 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 HABP4Q5JVS0 413 aaKnown RBP17.55■□□□□ 0.4
GNE-204ENST00000539208 CACHD1Q5VU97 1274 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 GDPD4Q6W3E5 623 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 RTL10Q7L3V2 364 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 EPHX4Q8IUS5 362 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 AADATQ8N5Z0 425 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 IRF7Q92985 503 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 BIRC7Q96CA5 298 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 PARVBQ9HBI1 364 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 SMOXQ9NWM0 555 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 TMPRSS11EQ9UL52 423 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 PDE10AQ9Y233 779 aa17.55■□□□□ 0.4
GNE-204ENST00000539208 PIKFYVEQ9Y2I7 2098 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 SOBPA7XYQ1 873 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 FFAR3O14843 346 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 GPR42O15529 346 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 NCK1P16333 377 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 ZNF30P17039 623 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 POLE2P56282 527 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 TMTC4Q5T4D3 741 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 BRAT1Q6PJG6 821 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 RFLNAQ6ZTI6 216 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms