RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 PCDHGC4Q9Y5F7 938 aa6.81□□□□□ -1.32
PROM1-219ENST00000539194 PMF1-BGLAPU3KQ54 211 aa6.81□□□□□ -1.32
PROM1-219ENST00000539194 NOTCH4Q99466 2003 aa6.81□□□□□ -1.32
PROM1-219ENST00000539194 FAM220BPB1ANY3 271 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 FFAR2O15552 330 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 SNX2O60749 519 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 WDR47O94967 919 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 LATS1O95835 1130 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 LDLRP01130 860 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ITIH1P19827 911 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 BMXP51813 675 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 PLA2G16P53816 162 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 MTPNP58546 118 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CACNG1Q06432 222 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 SLC14A1Q13336 389 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ZNF235Q14590 738 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 MOGQ16653 247 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 PHKG1Q16816 387 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CTXN3Q4LDR2 81 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CDKL4Q5MAI5 379 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CAPN13Q6MZZ7 669 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 DCDC5Q6ZRR9 648 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 WFDC5Q8TCV5 224 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 BOCQ9BWV1 1114 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CD244Q9BZW8 370 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 TOR3AQ9H497 397 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 DNMT3LQ9UJW3 386 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 PCDHB1Q9Y5F3 818 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 F5H5T6 163 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 DNAJB5O75953 348 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 HOXA9P31269 272 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 YAP1P46937 504 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 DGKQP52824 942 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 SKIV2LQ15477 1246 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 ZNF658BQ4V348 819 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 LHX8Q68G74 356 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 SCIMPQ6UWF3 145 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 GLB1LQ6UWU2 654 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 TSEN54Q7Z6J9 526 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CDYL2Q8N8U2 506 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 MAGEE2Q8TD90 523 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 EXT2Q93063 718 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ECHDC3Q96DC8 303 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 YIPF6Q96EC8 236 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 VMP1Q96GC9 406 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ZNF641Q96N77 438 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 CDK5RAP1Q96SZ6 601 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 BDH2Q9BUT1 245 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 AKIP1Q9NQ31 210 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 MTRRQ9UBK8 725 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 TMPRSS11EQ9UL52 423 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 PPT2Q9UMR5 302 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 A0A1B0GVM2 712 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 C2orf81A6NN90 581 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 VPS26AO75436 327 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 PGLSO95336 258 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 SEC24AO95486 1093 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 HTR1BP28222 390 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 SLC6A12P48065 614 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 CD97P48960 835 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 WNT3P56703 355 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 PTGR1Q14914 329 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ATP6AP1LQ52LC2 224 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ADGRF1Q5T601 910 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 ATG9BQ674R7 924 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 FAM43BQ6ZT52 329 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 RALGPS2Q86X27 583 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 CCDC71Q8IV32 467 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 RBM12BQ8IXT5 1001 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 GLB1L3Q8NCI6 653 aaPredicted RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 TRUB1Q8WWH5 349 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 PPWD1Q96BP3 646 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 TESCQ96BS2 214 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 NSUN3Q9H649 340 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 IL26Q9NPH9 171 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 DNAJB9Q9UBS3 223 aa6.8□□□□□ -1.32
PROM1-219ENST00000539194 TNPO3Q9Y5L0 923 aaKnown RBP6.8□□□□□ -1.32
PROM1-219ENST00000539194 SYNCRIPO60506 623 aaKnown RBP6.79□□□□□ -1.32
PROM1-219ENST00000539194 UGT2B11O75310 529 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 MT-ND1P03886 318 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 ANXA6P08133 673 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 THRBP10828 461 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 ACRV1P26436 265 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 ACLYP53396 1101 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 PON2Q15165 354 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 C6orf141Q5SZD1 244 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 IL31Q6EBC2 164 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 CERS6Q6ZMG9 384 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 R3HCC1LQ7Z5L2 792 aaKnown RBP6.79□□□□□ -1.32
PROM1-219ENST00000539194 ZC3H7AQ8IWR0 971 aaKnown RBP6.79□□□□□ -1.32
PROM1-219ENST00000539194 HS3ST5Q8IZT8 346 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 CBARPQ8N350 705 aaPredicted RBP6.79□□□□□ -1.32
PROM1-219ENST00000539194 SVOPLQ8N434 492 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 FNDC5Q8NAU1 212 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 SLC13A3Q8WWT9 602 aa6.79□□□□□ -1.32
PROM1-219ENST00000539194 ITFG2Q969R8 447 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms