RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DCAF13Q9NV06 445 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 AASSQ9UDR5 926 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 KCTD3Q9Y597 815 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 SPO11Q9Y5K1 396 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 LDB2O43679 373 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 GTF2E2P29084 291 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 DEFA1P59665 94 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 DEFA3P59666 94 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 PLIN5Q00G26 463 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 CYP4F3Q08477 520 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 SIM2Q14190 667 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 GBX1Q14549 363 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 PON2Q15165 354 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 TSNQ15631 228 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 SMUG1Q53HV7 270 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 DET1Q7L5Y6 550 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 GALNT5Q7Z7M9 940 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 PARP16Q8N5Y8 322 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 AMER2Q8N7J2 671 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 APOL4Q9BPW4 351 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 ITPAQ9BY32 194 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 RIBC2Q9H4K1 309 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 TM9SF3Q9HD45 589 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 PKP3Q9Y446 797 aa18.27■□□□□ 0.52
SFSWAP-207ENST00000538548 ANKRD28O15084 1053 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 KMOO15229 486 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 KCNE1P15382 129 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 MAGP20916 626 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 AGTR2P50052 363 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 ARHGAP1Q07960 439 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 MANEALQ5VSG8 457 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 AFMIDQ63HM1 303 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 ZNF544Q6NX49 715 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 SHQ1Q6PI26 577 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 CYP4Z1Q86W10 505 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 CHPFQ8IZ52 775 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 NXF2Q9GZY0 626 aaKnown RBP18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 MIR1-1HGQ9H1L0 117 aa18.27■□□□□ 0.51
SFSWAP-207ENST00000538548 LCHNA4D1U4 455 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 AIREO43918 545 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 FAM20BO75063 409 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 APOA1P02647 267 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 LCKP06239 509 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 ALOX12P18054 663 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 MZF1P28698 734 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 S100A5P33763 92 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 NRIP1P48552 1158 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 CLK3P49761 638 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 ACVR1Q04771 509 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 CHRNEQ04844 493 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 GPR149Q86SP6 731 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 IPCEF1Q8WWN9 437 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 FUBP1Q96AE4 644 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PYCR2Q96C36 320 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 SLC10A4Q96EP9 437 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 GABARAPL1Q9H0R8 117 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 GALPQ9UBC7 116 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 IKZF3Q9UKT9 509 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 GMPPBQ9Y5P6 360 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 WDR90Q96KV7 1748 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 EVPLLA8MZ36 301 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 HHLA1C9JL84 531 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 KLK8O60259 260 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 ZNF286BP0CG31 522 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 GGT5P36269 586 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PPP3CCP48454 512 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 ITKQ08881 620 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 ATAD3CQ5T2N8 411 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PAQR3Q6TCH7 311 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 SYTL1Q8IYJ3 562 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 CELF2-AS1Q8N7Q2 184 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 CDYL2Q8N8U2 506 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 SLC13A3Q8WWT9 602 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PDLIM5Q96HC4 596 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PCED1BQ96HM7 432 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 NT5MQ9NPB1 228 aa18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-207ENST00000538548 PDZK1P1A8MUH7 402 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 OR4F21O95013 312 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 MFN2O95140 757 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 CYP4B1P13584 511 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 IL1RNP18510 177 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 SEMA3AQ14563 771 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 SMN1Q16637 294 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 SIRPB2Q5JXA9 342 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 CPZQ66K79 652 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 ARMCX6Q7L4S7 300 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 POP5Q969H6 163 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 NCLNQ969V3 563 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 SIGLEC11Q96RL6 698 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 SH3GL1Q99961 368 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 IKZF5Q9H5V7 419 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 KCNH4Q9UQ05 1017 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 NCF1BA6NI72 391 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 NCF1CA8MVU1 366 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 ENPP3O14638 875 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 PAGE1O75459 146 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms