RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 HTR2AP28223 471 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PLEKHN1Q494U1 663 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 CERCAMQ5T4B2 595 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FKBP1CQ5VVH2 108 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ADGRA1Q86SQ6 560 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 C17orf64Q86WR6 236 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CMTR2Q8IYT2 770 aaKnown RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 OR10A6Q8NH74 314 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TMEM80Q96HE8 168 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PHOX2BQ99453 314 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 IDI2Q9BXS1 227 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 IPPKQ9H8X2 491 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TM9SF3Q9HD45 589 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 NUDT15Q9NV35 164 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 COMMD3Q9UBI1 195 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TMEM59LQ9UK28 342 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 SLC27A6Q9Y2P4 619 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TSPAN3O60637 253 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 IL3P08700 152 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 IFI30P13284 250 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FMO3P31513 532 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 XKP51811 444 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TGFBIQ15582 683 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 C4orf46Q504U0 113 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 MPPE1Q53F39 396 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 RNASE12Q5GAN4 147 aaKnown RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 IRAK1BP1Q5VVH5 260 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GET4Q7L5D6 327 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 SYVN1Q86TM6 617 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PIGZQ86VD9 579 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FBXO16Q8IX29 292 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 SLC44A3Q8N4M1 653 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 LINC00116Q8NCU8 138 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 AZIN2Q96A70 460 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GPER1Q99527 375 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 OSMRQ99650 979 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CPNE5Q9HCH3 593 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 C11orf16Q9NQ32 467 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 RBM7Q9Y580 266 aaKnown RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 PIGBOS1A0A0B4J2F0 54 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 DAPL1A0PJW8 107 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ATG13O75143 517 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PTTG1O95997 202 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 LINGO3P0C6S8 592 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 MAPK3P27361 379 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 SMSP52788 366 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 YBEYP58557 167 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 RPS14P62263 151 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 SH3PXD2AQ5TCZ1 1133 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 DET1Q7L5Y6 550 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ADGRD2Q7Z7M1 963 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 VANGL1Q8TAA9 524 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 CHIAQ9BZP6 476 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZBTB26Q9HCK0 441 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 IKZF2Q9UKS7 526 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PPM1HQ9ULR3 514 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CCL15-CCL14A0A0B4J2E2 113 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TOR1BO14657 336 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SAGP10523 405 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 FPR1P21462 350 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZNF132P52740 706 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RGS8P57771 180 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 C2orf80Q0P641 193 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CCL15Q16663 113 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TSTD2Q5T7W7 516 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 MEDAGQ5VYS4 303 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RAP1GAP2Q684P5 730 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 OR2T5Q6IEZ7 315 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TMEM214Q6NUQ4 689 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 C15orf52Q6ZUT6 534 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 ANKRD13BQ86YJ7 626 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 FSTL5Q8N475 847 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 OR2T29Q8NH02 315 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 POF1BQ8WVV4 589 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 KAT2AQ92830 837 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 KREMEN1Q96MU8 473 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PFDN5Q99471 154 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TBC1D17Q9HA65 648 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TRIM36Q9NQ86 728 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZNF358Q9NW07 568 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 HACL1Q9UJ83 578 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SNX10Q9Y5X0 201 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 C1orf167Q5SNV9 1468 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TSPOAP1O95153 1857 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TRAV19A0A0A6YYK7 116 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 C5orf51A6NDU8 294 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 DISC1C4P0D8 188 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 MATN3O15232 486 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 NUAK1O60285 661 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 XYLBO75191 536 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CSDE1O75534 798 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 C22orf31O95567 290 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RAB36O95755 333 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ESR1P03372 595 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 LAMP2P13473 410 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SPAM1P38567 509 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 MXD1Q05195 221 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CBX2Q14781 532 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 SLC9B1Q4ZJI4 515 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms