RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ARNTLO00327 626 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 SEC24DO94855 1032 aaPredicted RBP24.41■■□□□ 1.5
RAB40C-204ENST00000538492 LAG3P18627 525 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 GGT5P36269 586 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 TMTC4Q5T4D3 741 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 CPXM2Q8N436 756 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 DTWD1Q8N5C7 304 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 ULK4Q96C45 1275 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 VPS50Q96JG6 964 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 NSMCE2Q96MF7 247 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 RC3H2Q9HBD1 1191 aaKnown RBP24.41■■□□□ 1.5
RAB40C-204ENST00000538492 DMTF1Q9Y222 760 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 ATP11BQ9Y2G3 1177 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 RASAL1O95294 804 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 EPB42P16452 691 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 HLA-FP30511 346 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 SNRPD1P62314 119 aaKnown RBP24.41■■□□□ 1.5
RAB40C-204ENST00000538492 FAM174BQ3ZCQ3 159 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 PROSER1Q86XN7 944 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 TBC1D21Q8IYX1 336 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 CBARPQ8N350 705 aaPredicted RBP24.41■■□□□ 1.5
RAB40C-204ENST00000538492 TMIGD2Q96BF3 282 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 CHID1Q9BWS9 393 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 ZDHHC6Q9H6R6 413 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 VAPAQ9P0L0 249 aa24.41■■□□□ 1.5
RAB40C-204ENST00000538492 EIF3LQ9Y262 564 aaKnown RBP24.41■■□□□ 1.5
RAB40C-204ENST00000538492 LEFTY2O00292 366 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 DFNA5O60443 496 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 LRG1P02750 347 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 UMPSP11172 480 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 LHCGRP22888 699 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 NSG1P42857 185 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 SLC7A9P82251 487 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 PTSQ03393 145 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 PWP1Q13610 501 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 IMPG1Q17R60 797 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 MPP7Q5T2T1 576 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 TPRG1Q6ZUI0 275 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 SPRED1Q7Z699 444 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 TMC8Q8IU68 726 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 ZNF786Q8N393 782 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 LIX1Q8N485 282 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 SCRN2Q96FV2 425 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 MBD1Q9UIS9 605 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 NEUROG3Q9Y4Z2 214 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 PRRC2BQ5JSZ5 2229 aaKnown RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 KANSL1LA0AUZ9 987 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 SEC22BO75396 215 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 MSH3P20585 1137 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 PRMT2P55345 433 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 B4GALNT1Q00973 533 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 KIAA0040Q15053 153 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 TTLL9Q3SXZ7 439 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 DNAJC14Q6Y2X3 702 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 DET1Q7L5Y6 550 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 RGL4Q8IZJ4 473 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 KRTCAP2Q8N6L1 136 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 PAPD5Q8NDF8 572 aaKnown RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 CLHC1Q8NHS4 586 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 MAGEE2Q8TD90 523 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 SKA2Q8WVK7 121 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 SLC13A3Q8WWT9 602 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 FBXL20Q96IG2 436 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 CLK4Q9HAZ1 481 aaKnown RBP24.4■■□□□ 1.5
RAB40C-204ENST00000538492 PCDHB3Q9Y5E6 796 aa24.4■■□□□ 1.5
RAB40C-204ENST00000538492 LDLRP01130 860 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 ZNF23P17027 643 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 CRY1Q16526 586 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 FXNQ16595 210 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 B3GNT6Q6ZMB0 384 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 COPS8Q99627 209 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 TMEM39AQ9NV64 488 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 ARL15Q9NXU5 204 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 CD84Q9UIB8 345 aa24.39■■□□□ 1.5
RAB40C-204ENST00000538492 TRAV19A0A0A6YYK7 116 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 GRXCR2A6NFK2 248 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 STK16O75716 305 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 KCNH1O95259 989 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 CCR7P32248 378 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 RPIAP49247 311 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 ADRM1Q16186 407 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 CPSF6Q16630 551 aaKnown RBP eCLIP24.39■■□□□ 1.49
RAB40C-204ENST00000538492 SLC44A4Q53GD3 710 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 TTC33Q6PID6 262 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-204ENST00000538492 ZBTB18Q99592 522 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 SUV39H2Q9H5I1 410 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 SOX17Q9H6I2 414 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-204ENST00000538492 PTTG2Q9NZH5 202 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 MAGEL2Q9UJ55 1249 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 CCL26Q9Y258 94 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 ZNF510Q9Y2H8 683 aa24.39■■□□□ 1.49
RAB40C-204ENST00000538492 PLXNB3Q9ULL4 1909 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 UGT2B4P06133 528 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 NFKBIAP25963 317 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 GNPDA1P46926 289 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 SLC36A3Q495N2 470 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 C22orf39Q6P5X5 142 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 USP45Q70EL2 814 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 LYSMD1Q96S90 227 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 CORO1BQ9BR76 489 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms