RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SLC4A1P02730 911 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ELFN1P0C7U0 828 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3HP0C7X1 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SP9P0CG40 484 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 CR2P20023 1033 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 HLA-DPA1P20036 260 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 DRD3P35462 400 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 COILP38432 576 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 P2RY2P41231 377 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 KCNJ1P48048 391 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 METAP1P53582 386 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ADPRHP54922 357 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 WNT3AP56704 352 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SARNPP82979 210 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PLP2Q04941 152 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 DMWDQ09019 674 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TRAF2Q12933 501 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 GPS1Q13098 491 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SGCGQ13326 291 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NFYCQ13952 458 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 DHX34Q14147 1143 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ARHGEF7Q14155 803 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SIM2Q14190 667 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TRIP13Q15645 432 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 UGP2Q16851 508 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TTMPQ5BVD1 217 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 LRRC73Q5JTD7 316 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SYCP2LQ5T4T6 812 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PIP5KL1Q5T9C9 394 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 FAXCQ5TGI0 409 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3GQ6DHY5 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3CQ6IPX1 549 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NAPEPLDQ6IQ20 393 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TTC27Q6P3X3 843 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PGM2L1Q6PCE3 622 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NCEH1Q6PIU2 408 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 LRIG3Q6UXM1 1119 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PPP1R21Q6ZMI0 780 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PARS2Q7L3T8 475 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 LPCAT2Q7L5N7 544 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 KDELC2Q7Z4H8 507 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 MAATS1Q7Z4T9 603 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 YTHDF3Q7Z739 585 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PRPF39Q86UA1 669 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TAX1BP1Q86VP1 789 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 WDR5BQ86VZ2 330 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 MAML2Q8IZL2 1156 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TBC1D3Q8IZP1 549 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ARFGAP2Q8N6H7 521 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 EIF1ADQ8N9N8 165 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 DNAAF3Q8N9W5 541 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SPATA4Q8NEY3 305 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 LPCAT1Q8NF37 534 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 OR2T34Q8NGX1 318 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SPATA22Q8NHS9 363 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PPP1R14CQ8TAE6 165 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ARRDC2Q8TBH0 407 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 BCAS4Q8TDM0 211 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 CXorf40AQ8TE69 158 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 RLN3Q8WXF3 142 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.29□□□□□ -1.726e-13■■□□□ 14.1
SNHG1-208ENST00000538266 SLCO2A1Q92959 643 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ARRDC3Q96B67 414 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ECHDC3Q96DC8 303 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NEIL1Q96FI4 390 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 RAX2Q96IS3 184 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 FEM1CQ96JP0 617 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 GNRHR2Q96P88 292 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 LRRC37BQ96QE4 947 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 FCRL5Q96RD9 977 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 KRT12Q99456 494 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 MENTQ9BUN1 341 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 FICDQ9BVA6 458 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 GPR174Q9BXC1 333 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 C1QTNF7Q9BXJ2 289 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 TDRD1Q9BXT4 1180 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 RAB17Q9H0T7 212 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PCED1AQ9H1Q7 454 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 KCNH6Q9H252 994 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 NEUROG2Q9H2A3 272 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PREBQ9HCU5 417 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ITM2CQ9NQX7 267 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 SERGEFQ9UGK8 458 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PCYOX1Q9UHG3 505 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 PHTF1Q9UMS5 762 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 CHKBQ9Y259 395 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 UTP11Q9Y3A2 253 aaKnown RBP4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ANKRD36A6QL64 1941 aa4.29□□□□□ -1.72
SNHG1-208ENST00000538266 ZDBF2Q9HCK1 2354 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 IGHV1OR15-9A0A0B4J2B8 117 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 A0A0J9YYE9 177 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 C1orf232A0A0U1RR37 186 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 CAPN8A6NHC0 703 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 A8MX80 341 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 ANKRD66B4E2M5 251 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 H0YHG0 523 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 AP3B1O00203 1094 aa4.28□□□□□ -1.72
SNHG1-208ENST00000538266 HTRA2O43464 458 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-208ENST00000538266 PLRG1O43660 514 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms