RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DHCR24Q15392 516 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 TBC1D25Q3MII6 688 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 LCN8Q6JVE9 175 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 RETREG3Q86VR2 466 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ZFAND4Q86XD8 727 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 AADATQ8N5Z0 425 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 RNF148Q8N7C7 305 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 MCOLN3Q8TDD5 553 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 MRGPRX3Q96LB0 322 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 UHRF1Q96T88 793 aaPredicted RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 YIPF3Q9GZM5 350 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 LINC00597Q9H2U6 94 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ARMC1Q9NVT9 282 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 PTGDR2Q9Y5Y4 395 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 SCN8AQ9UQD0 1980 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 SERTM1A2A2V5 107 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 H0Y858 1186 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 LSM1O15116 133 aaKnown RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 COQ9O75208 318 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 CLDN9O95484 217 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 NFATC1O95644 943 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 GUCA1CO95843 209 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 PRNPP04156 253 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 UMPSP11172 480 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 PIM1P11309 404 aaPredicted RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 ADH5P11766 374 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 IMPDH2P12268 514 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ACPPP15309 386 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 EPCAMP16422 314 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 CCR7P32248 378 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 GNPDA1P46926 289 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ERFP50548 548 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 PHKG1Q16816 387 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 AP5B1Q2VPB7 878 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 CACHD1Q5VU97 1274 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 UBE2R2Q712K3 238 aaPredicted RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 GRASPQ7Z6J2 395 aaPredicted RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 UBE2Q1Q7Z7E8 422 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 SLC15A3Q8IY34 581 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 CHST14Q8NCH0 376 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 OR2T11Q8NH01 316 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ATL1Q8WXF7 558 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ASB11Q8WXH4 323 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ESAMQ96AP7 390 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 ACOX2Q99424 681 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 TMEM79Q9BSE2 394 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 EPHX3Q9H6B9 360 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 PIDD1Q9HB75 910 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 IRAK4Q9NWZ3 460 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 DUS2Q9NX74 493 aaKnown RBP13.31□□□□□ -0.28
SMG6-203ENST00000536871 ARL15Q9NXU5 204 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 OBP2AQ9NY56 170 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 SNX6Q9UNH7 406 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 WNT6Q9Y6F9 365 aa13.31□□□□□ -0.28
SMG6-203ENST00000536871 A8MX80 341 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 NPIPB8E9PQR5 432 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 GFYI3L273 518 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 HNRNPRO43390 633 aaKnown RBP13.3□□□□□ -0.28
SMG6-203ENST00000536871 UGDHO60701 494 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 LEFTY1O75610 366 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 GPIP06744 558 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 GSTM1P09488 218 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 FCGR1AP12314 374 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 SYN1P17600 705 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 TCN1P20061 433 aaPredicted RBP13.3□□□□□ -0.28
SMG6-203ENST00000536871 IL10P22301 178 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 SLC6A2P23975 617 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 MAPK1P28482 360 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 B4GALNT1Q00973 533 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 GSTM4Q03013 218 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 FBXO48Q5FWF7 155 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 THEMIS2Q5TEJ8 643 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 LPCAT4Q643R3 524 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 TMEM154Q6P9G4 183 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 LAYNQ6UX15 382 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 PROSER1Q86XN7 944 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 PTRH1Q86Y79 214 aaKnown RBP13.3□□□□□ -0.28
SMG6-203ENST00000536871 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 RBM12BQ8IXT5 1001 aaKnown RBP13.3□□□□□ -0.28
SMG6-203ENST00000536871 SFRP1Q8N474 314 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 USP7Q93009 1102 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 ELOVL2Q9NXB9 296 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 PACSIN3Q9UKS6 424 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 ASB1Q9Y576 335 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 PCDHA9Q9Y5H5 950 aa13.3□□□□□ -0.28
SMG6-203ENST00000536871 FXYD1O00168 92 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 TIMP2P16035 220 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 HOXB6P17509 224 aaKnown RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 CA5AP35218 305 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 IMPG1Q17R60 797 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ARSIQ5FYB1 569 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 C6orf10Q5SRN2 563 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 HENMT1Q5T8I9 393 aaKnown RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 CYP20A1Q6UW02 462 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CYP2U1Q7Z449 544 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ARHGAP22Q7Z5H3 698 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 TNIP2Q8NFZ5 429 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 PROKR1Q8TCW9 393 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms