RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	DDA1	Q9BW61	102 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	RAB33B	Q9H082	229 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZNF768	Q9H5H4	540 aa	Known RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	XAB2	Q9HCS7	855 aa	Known RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	KCND1	Q9NSA2	647 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ANAPC5	Q9UJX4	755 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	CDYL	Q9Y232	598 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	COLEC10	Q9Y6Z7	277 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ADAMTS20	P59510	1910 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	IGSF10	Q6WRI0	2623 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZCWPW2	A0A1B0GU75	182 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	FAM237B	A0A1B0GVD1	139 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	QSOX1	O00391	747 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	BTN3A3	O00478	584 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	NDUFS3	O75489	264 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	GSTM1	P09488	218 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	TPBGL	P0DKB5	382 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	LIPC	P11150	499 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	POLR2C	P19387	275 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	WT1	P19544	449 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	NDUFS1	P28331	727 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	FMO4	P31512	558 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	TTPA	P49638	278 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	KPNA2	P52292	529 aa	Known RBP	12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	GSTM4	Q03013	218 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	HSPA14	Q0VDF9	509 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	DHX34	Q14147	1143 aa	Known RBP	12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	KCNAB1	Q14722	419 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	TYSND1	Q2T9J0	566 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	MSS51	Q4VC12	460 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	TMEM164	Q5U3C3	297 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	IZUMO3	Q5VZ72	239 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	CENPU	Q71F23	418 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	TMEM135	Q86UB9	458 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	UNC5B	Q8IZJ1	945 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	ACVR1C	Q8NER5	493 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZFPM2	Q8WW38	1151 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	LPGAT1	Q92604	370 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	ELMO2	Q96JJ3	720 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	BIRC8	Q96P09	236 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	CARD6	Q9BX69	1037 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	SAMD15	Q9P1V8	674 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	SEMA5B	Q9P283	1151 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	PLAGL1	Q9UM63	463 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	ICK	Q9UPZ9	632 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	HEBP2	Q9Y5Z4	205 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	MAD1L1	Q9Y6D9	718 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	RPS6KL1	Q9Y6S9	549 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	ATM	Q13315	3056 aa		12.8	□□□□□ -0.36
PRKDC-206	ENST00000536429	UBA6	A0AVT1	1052 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	BTN3A1	O00481	513 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	TOX3	O15405	576 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	TTI1	O43156	1089 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	GPC4	O75487	556 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	FOLR1	P15328	257 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZNF28	P17035	718 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	NELFE	P18615	380 aa	Known RBP	12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	RPS3	P23396	243 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	3e-7	■■■□□ 17.4
PRKDC-206	ENST00000536429	AOAH	P28039	575 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	EIF3B	P55884	814 aa	Known RBP	12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	RAB15	P59190	212 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	FOXM1	Q08050	763 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	DCAF12	Q5T6F0	453 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	ARHGAP40	Q5TG30	622 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	PTRHD1	Q6GMV3	140 aa	Known RBP	12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	NEPRO	Q6NW34	567 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	KLHL35	Q6PF15	583 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	OOSP2	Q86WS3	158 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	IGDCC3	Q8IVU1	814 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	DENND6A	Q8IWF6	608 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	SLC22A15	Q8IZD6	547 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	LMNTD1	Q8N9Z9	388 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	LCN9	Q8WX39	176 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	FAM136A	Q96C01	138 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	SLC41A2	Q96JW4	573 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR6C1	Q96RD1	312 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	WDR83	Q9BRX9	315 aa	Known RBP	12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	SPRY4	Q9C004	299 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	B3GNT4	Q9C0J1	378 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	SRMS	Q9H3Y6	488 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	MVB12B	Q9H7P6	319 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	PLAC1	Q9HBJ0	212 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	FBXO8	Q9NRD0	319 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	GALP	Q9UBC7	116 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	CIDEB	Q9UHD4	219 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	GNPTG	Q9UJJ9	305 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	ASF1A	Q9Y294	204 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	CRYL1	Q9Y2S2	319 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	CACNA1G	O43497	2377 aa		12.79	□□□□□ -0.36
PRKDC-206	ENST00000536429	PIKFYVE	Q9Y2I7	2098 aa		12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	TEX51	A0A1B0GUA7	166 aa		12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	STMND1	H3BQB6	276 aa		12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	POLR1C	O15160	346 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	TP73	O15350	636 aa		12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	NIPSNAP2	O75323	286 aa		12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	TIAF1	O95411	115 aa		12.78	□□□□□ -0.36
PRKDC-206	ENST00000536429	EBLN1	P0CF75	366 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms