RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ERI2A8K979 691 aaKnown RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 KDM1AO60341 852 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 AP2A1O95782 977 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 FTH1P02794 183 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 NTRK1P04629 796 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 POLR2CP19387 275 aaPredicted RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 PTPN4P29074 926 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 NSG1P42857 185 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 POU6F1Q14863 301 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 GPR19Q15760 415 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 UGT8Q16880 541 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 KCTD11Q693B1 232 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 APLFQ8IW19 511 aaPredicted RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 TEX19Q8NA77 164 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 MR1Q95460 341 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 ZNF501Q96CX3 271 aaPredicted RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 RNF31Q96EP0 1072 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 LRFN5Q96NI6 719 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 TTC1Q99614 292 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 FRMD8P1Q9BZ68 369 aaPredicted RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 TFB2MQ9H5Q4 396 aaKnown RBP12.76□□□□□ -0.37
RTN3-207ENST00000536011 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
RTN3-207ENST00000536011 C2orf74A8MZ97 194 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 CCL22O00626 93 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 LIN7AO14910 233 aaPredicted RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 CYP2A7P20853 494 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 PREPP48147 710 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 ARCN1P48444 511 aaKnown RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 PLOD1Q02809 727 aaPredicted RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 ITIH4Q14624 930 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 SYTL3Q4VX76 610 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 LYPLAL1Q5VWZ2 237 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 IZUMO3Q5VZ72 239 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 AADACL2Q6P093 401 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 AMIGO1Q86WK6 493 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 LILRA3Q8N6C8 439 aaPredicted RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 NAT14Q8WUY8 206 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 SLC7A5P2Q9GIP4 190 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 OR52A5Q9H2C5 316 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 IMPACTQ9P2X3 320 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 SERTAD3Q9UJW9 196 aa12.75□□□□□ -0.37
RTN3-207ENST00000536011 G3BP2Q9UN86 482 aaKnown RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 SPENQ96T58 3664 aaKnown RBP12.75□□□□□ -0.37
RTN3-207ENST00000536011 SLC9B1P1A6NJY1 282 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 METTL18O95568 372 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 FTCDO95954 541 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 HBQ1P09105 142 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 FURINP09958 794 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 RAB40ALP0C0E4 278 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 MSNP26038 577 aaKnown RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 PRDX3P30048 256 aaKnown RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 SHMT2P34897 504 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 LMAN1P49257 510 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 FOXK1P85037 733 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 CDH17Q12864 832 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 SEMA5AQ13591 1074 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 BOP1Q14137 746 aaKnown RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 SEL1L2Q5TEA6 688 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 CERS6Q6ZMG9 384 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 CLDN19Q8N6F1 224 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 DNAAF3Q8N9W5 541 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 OR52E1Q8NGJ3 308 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 SLC35B2Q8TB61 432 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 TFGQ92734 400 aaPredicted RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 N4BP2L2Q92802 583 aaPredicted RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 CLIP3Q96DZ5 547 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 C17orf62Q9BQA9 187 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 DPH2Q9BQC3 489 aaPredicted RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 HGH1Q9BTY7 390 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 TSSK1BQ9BXA7 367 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 RBSNQ9H1K0 784 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 ACTR5Q9H9F9 607 aaPredicted RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 POLG2Q9UHN1 485 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
RTN3-207ENST00000536011 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
RTN3-207ENST00000536011 MAST4O15021 2626 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 MROH6A6NGR9 719 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 TMEM150CB9EJG8 249 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 C9J4A7 227 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 E7EVH7 732 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 MEN1O00255 615 aa12.73□□□□□ -0.37
RTN3-207ENST00000536011 BTN3A1O00481 513 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms