RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 UBA5Q9GZZ9 404 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 ATP13A3Q9H7F0 1226 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 A4GALTQ9NPC4 353 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 NUDT4Q9NZJ9 180 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 NPAP1Q9NZP6 1156 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 PRRC2AP48634 2157 aaKnown RBP3.77□□□□□ -1.81
VBP1-203ENST00000535916 ASTN2O75129 1339 aaPredicted RBP3.76□□□□□ -1.81
VBP1-203ENST00000535916 E9PI62 339 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 SOCS3O14543 225 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 GPC4O75487 556 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 PRKRAO75569 313 aaKnown RBP3.76□□□□□ -1.81
VBP1-203ENST00000535916 KRTAP1-4P0C5Y4 121 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 CA4P22748 312 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 PTGER3P43115 390 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 PPM1FP49593 454 aaPredicted RBP3.76□□□□□ -1.81
VBP1-203ENST00000535916 GSDMDP57764 484 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 ELAVL2Q12926 359 aaKnown RBP3.76□□□□□ -1.81
VBP1-203ENST00000535916 PLA2G7Q13093 441 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 EIF4A2Q14240 407 aaKnown RBP3.76□□□□□ -1.81
VBP1-203ENST00000535916 TAF13Q15543 124 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 PCGF3Q3KNV8 242 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 ZNF354CQ86Y25 554 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 PRSS33Q8NF86 280 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 USP28Q96RU2 1077 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 KRT12Q99456 494 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 DGCR6LQ9BY27 220 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 TRIM6Q9C030 488 aaPredicted RBP3.76□□□□□ -1.81
VBP1-203ENST00000535916 PREBQ9HCU5 417 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 CRYL1Q9Y2S2 319 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 ANGPTL3Q9Y5C1 460 aa3.76□□□□□ -1.81
VBP1-203ENST00000535916 IGHV3OR16-10A0A075B7F0 116 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 PRSS51A0A1B0GVH4 220 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 A0A1W2PN81 502 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 ELOVL7A1L3X0 281 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 SCAMP1O15126 338 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 ACTN1P12814 892 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 CHRNA7P36544 502 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 OPRL1P41146 370 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 B3GALT5-AS1P59052 145 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 PRKCZQ05513 592 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 NFATC2Q13469 925 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 MED22Q15528 200 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 TBCEQ15813 527 aaPredicted RBP3.75□□□□□ -1.81
VBP1-203ENST00000535916 SLC25A30Q5SVS4 291 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 RARS2Q5T160 578 aaKnown RBP3.75□□□□□ -1.81
VBP1-203ENST00000535916 FIP1L1Q6UN15 594 aaKnown RBP3.75□□□□□ -1.81
VBP1-203ENST00000535916 CFAP77Q6ZQR2 320 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 PTAR1Q7Z6K3 402 aaPredicted RBP3.75□□□□□ -1.81
VBP1-203ENST00000535916 HOGA1Q86XE5 327 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 C11orf53Q8IXP5 236 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 MAPKAPK5-AS1Q8N8E1 139 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 GTF3AQ92664 365 aaKnown RBP3.75□□□□□ -1.81
VBP1-203ENST00000535916 AZIN2Q96A70 460 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 MAF1Q9H063 256 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 HHATLQ9HCP6 504 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 FBXL17Q9UF56 701 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 MAN1B1Q9UKM7 699 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 PNMA2Q9UL42 364 aa3.75□□□□□ -1.81
VBP1-203ENST00000535916 NDUFS4O43181 175 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 GH2P01242 217 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 EIF2S1P05198 315 aaKnown RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 PAX3P23760 479 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 NMBRP28336 390 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 MMP12P39900 470 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 PGFP49763 221 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 CASP6P55212 293 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 GSCP56915 257 aaPredicted RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 RPS3AP61247 264 aaKnown RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 DHX8Q14562 1220 aaKnown RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 ZSCAN23Q3MJ62 389 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 KLHL26Q53HC5 615 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 WLSQ5T9L3 541 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 INTS11Q5TA45 600 aaKnown RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 TICAM2Q86XR7 235 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 MARVELD2Q8N4S9 558 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 TBC1D16Q8TBP0 767 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 SLCO2A1Q92959 643 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 ARHGEF2Q92974 986 aaKnown RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 CENPTQ96BT3 561 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 WWTR1Q9GZV5 400 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 PDCL3Q9H2J4 239 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 SDR39U1Q9NRG7 319 aaPredicted RBP3.74□□□□□ -1.81
VBP1-203ENST00000535916 SMC4Q9NTJ3 1288 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 PDP2Q9P2J9 529 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 THEGQ9P2T0 379 aa3.74□□□□□ -1.81
VBP1-203ENST00000535916 IGLV3-10A0A075B6K4 115 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 A0A1W2PPR1 153 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 CLEC3BP05452 202 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 ACADMP11310 421 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 TMEM11P17152 192 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 RBMS1P29558 406 aaKnown RBP3.73□□□□□ -1.81
VBP1-203ENST00000535916 CCR9P51686 369 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 LIMK2P53671 638 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 HUNKP57058 714 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 PNRC1Q12796 327 aaPredicted RBP3.73□□□□□ -1.81
VBP1-203ENST00000535916 RALBP1Q15311 655 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 Q6ZR54 194 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 CLEC17AQ6ZS10 378 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 ZNF584Q8IVC4 421 aa3.73□□□□□ -1.81
VBP1-203ENST00000535916 RASL10AQ92737 203 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms