RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 FUT8Q9BYC5 575 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 ABCG4Q9H172 646 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 LRRN3Q9H3W5 708 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 RHOJQ9H4E5 214 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 UCK1Q9HA47 277 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 KCNK4Q9NYG8 393 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 KLHL42Q9P2K6 505 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 CORO1CQ9ULV4 474 aaPredicted RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 DHRS7Q9Y394 339 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 HEBP2Q9Y5Z4 205 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 IGHV1OR21-1A0A087WYE8 117 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 LILRA5A6NI73 299 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 VPS26AO75436 327 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 FAM155BO75949 473 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 CD1CP29017 333 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 ATP5DP30049 168 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 PGGT1BP53609 377 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 PMS2P54278 862 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 VSNL1P62760 191 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 GABPB1Q06547 395 aaPredicted RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 ABRQ12979 859 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 NAB1Q13506 487 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 KRT33BQ14525 404 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 AMZ1Q400G9 498 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 CDCP2Q5VXM1 449 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 NKAIN2Q5VXU1 208 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 TRMT10CQ7L0Y3 403 aaKnown RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 CHCHD4Q8N4Q1 142 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 OR5AR1Q8NGP9 310 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 CD200R1Q8TD46 325 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 ZFPM2Q8WW38 1151 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 JPH3Q8WXH2 748 aaPredicted RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 INPP5DQ92835 1189 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 VPS39Q96JC1 886 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 FERD3LQ96RJ6 166 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 CYTH2Q99418 400 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 OLFM1Q99784 485 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 CPNE1Q99829 537 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 ACSS3Q9H6R3 686 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 MVB12BQ9H7P6 319 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 SYNDIG1Q9H7V2 258 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 TAS2R13Q9NYV9 303 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 TXNDC16Q9P2K2 825 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 ASF1AQ9Y294 204 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 MTO1Q9Y2Z2 717 aaKnown RBP11.76□□□□□ -0.53
CHD4-203ENST00000535717 VWA7Q9Y334 891 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 COLEC10Q9Y6Z7 277 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 AKAP13Q12802 2813 aa11.76□□□□□ -0.53
CHD4-203ENST00000535717 UNC13CQ8NB66 2214 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 COL27A1Q8IZC6 1860 aaPredicted RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 FAM95CA0A1B0GW59 222 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 ZW10O43264 779 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 RIPK2O43353 540 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 TOP3BO95985 862 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 CD9P21926 228 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 FDXRP22570 491 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 MCM3P25205 808 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 NDUFS1P28331 727 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 GP5P40197 560 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 SKIV2L2P42285 1042 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 EPHA4P54764 986 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 CFHR1Q03591 330 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 PRKG2Q13237 762 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 TTLL9Q3SXZ7 439 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 HES3Q5TGS1 186 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 FAM45BPQ6NSW5 357 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 UGT3A1Q6NUS8 523 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 WDR93Q6P2C0 686 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 USP53Q70EK8 1073 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 CPNE9Q8IYJ1 553 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 CFAP61Q8NHU2 1237 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 UHMK1Q8TAS1 419 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 FAM45AQ8TCE6 357 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 SKA2Q8WVK7 121 aaPredicted RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHD4-203ENST00000535717 ANKRD7Q92527 254 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 MRRFQ96E11 262 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 ELMO2Q96JJ3 720 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 GFM1Q96RP9 751 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 RBBP8Q99708 897 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 NRTNQ99748 197 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 HGH1Q9BTY7 390 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 EPB41L4BQ9H329 900 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 TRIT1Q9H3H1 467 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 KIR3DX1Q9H7L2 352 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 SLC24A2Q9UI40 661 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 TRMT6Q9UJA5 497 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 ATXN7L1Q9ULK2 861 aaPredicted RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 RUVBL2Q9Y230 463 aaKnown RBP11.75□□□□□ -0.53
CHD4-203ENST00000535717 NFS1Q9Y697 457 aa11.75□□□□□ -0.53
CHD4-203ENST00000535717 A0A087WUV0 522 aaPredicted RBP11.74□□□□□ -0.53
CHD4-203ENST00000535717 D6RAR5 112 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms