RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 FAM180BQ6P0A1 224 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 C4orf50Q6ZRC1 276 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 Q6ZRP5 223 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 CLEC17AQ6ZS10 378 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 LRRTM1Q86UE6 522 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 C11orf53Q8IXP5 236 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 TRPC4APQ8TEL6 797 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 CENPTQ96BT3 561 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 GPATCH1Q9BRR8 931 aaKnown RBP4.23□□□□□ -1.73
CCDC7-207ENST00000535327 MAF1Q9H063 256 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 A4GALTQ9NPC4 353 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 ERAP1Q9NZ08 941 aa4.23□□□□□ -1.73
CCDC7-207ENST00000535327 LAS1LQ9Y4W2 734 aaKnown RBP4.23□□□□□ -1.73
CCDC7-207ENST00000535327 HMGB1P1B2RPK0 211 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 BAIAP3O94812 1187 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 CLEC3BP05452 202 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 TRIM49P0CI25 452 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 TRIM49CP0CI26 452 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 BSGP35613 385 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 PIK3CAP42336 1068 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 MAGEA11P43364 429 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 CCR10P46092 362 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 NAP1L1P55209 391 aaKnown RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 RAPSNQ13702 412 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 KRT32Q14532 448 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 RALBP1Q15311 655 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 E2F5Q15329 346 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 MAPRE1Q15691 268 aaKnown RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 TBCEQ15813 527 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 SGSM1Q2NKQ1 1148 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 TAF1BQ53T94 588 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 HAUS3Q68CZ6 603 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 ZNF554Q86TJ5 538 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 SUSD6Q92537 303 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 GAD1Q99259 594 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 SOSTQ9BQB4 213 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 ANGPTL3Q9Y5C1 460 aa4.22□□□□□ -1.73
CCDC7-207ENST00000535327 TDRD9Q8NDG6 1382 aaKnown RBP4.22□□□□□ -1.73
CCDC7-207ENST00000535327 SOS1Q07889 1333 aaPredicted RBP4.21□□□□□ -1.73
CCDC7-207ENST00000535327 MSGN1A6NI15 193 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 ZNF195O14628 629 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 NDUFS3O75489 264 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 B3GALT5-AS1P59052 145 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 CCDC30Q5VVM6 783 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 PTAR1Q7Z6K3 402 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-207ENST00000535327 LACC1Q8IV20 430 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 RAB42Q8N4Z0 105 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 TIGD1Q96MW7 591 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 HGH1Q9BTY7 390 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 UPF3AQ9H1J1 476 aaKnown RBP4.21□□□□□ -1.74
CCDC7-207ENST00000535327 ATP13A3Q9H7F0 1226 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 SETD4Q9NVD3 440 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 EHD2Q9NZN4 543 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 FLRT3Q9NZU0 649 aa4.21□□□□□ -1.74
CCDC7-207ENST00000535327 SPIN1Q9Y657 262 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-207ENST00000535327 EPM2AB3EWF7 344 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 OGG1O15527 345 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 DDX58O95786 925 aaKnown RBP4.2□□□□□ -1.74
CCDC7-207ENST00000535327 SCGB1D1O95968 90 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 UGT1A4P22310 534 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 ARF3P61204 181 aaPredicted RBP4.2□□□□□ -1.74
CCDC7-207ENST00000535327 RPS3AP61247 264 aaKnown RBP4.2□□□□□ -1.74
CCDC7-207ENST00000535327 ARF1P84077 181 aaKnown RBP4.2□□□□□ -1.74
CCDC7-207ENST00000535327 SETQ01105 290 aaPredicted RBP4.2□□□□□ -1.74
CCDC7-207ENST00000535327 PEX6Q13608 980 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 HACE1Q8IYU2 909 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 PDILTQ8N807 584 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 SGCDQ92629 289 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 ELMOD3Q96FG2 381 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 NSL1Q96IY1 281 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 SLC22A12Q96S37 553 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 FUCA2Q9BTY2 467 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 RRP7BPQ9NSQ0 103 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 NUDT4Q9NZJ9 180 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 NPAP1Q9NZP6 1156 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 KCNE2Q9Y6J6 123 aa4.2□□□□□ -1.74
CCDC7-207ENST00000535327 PGPEP1LA6NFU8 196 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 ZBED4O75132 1171 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 RNASEH2AO75792 299 aaKnown RBP4.19□□□□□ -1.74
CCDC7-207ENST00000535327 HIST1H2ABP04908 130 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 HIST1H2ADP20671 130 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 MS4A2Q01362 244 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 LMOD3Q0VAK6 560 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 MAMLD1Q13495 774 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 KLHL26Q53HC5 615 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 GLDNQ6ZMI3 551 aaPredicted RBP4.19□□□□□ -1.74
CCDC7-207ENST00000535327 HIST3H2AQ7L7L0 130 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 TBC1D1Q86TI0 1168 aaPredicted RBP4.19□□□□□ -1.74
CCDC7-207ENST00000535327 FRMD1Q8N878 549 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 OR2L2Q8NH16 312 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 DDOQ99489 341 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 ABHD6Q9BV23 337 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 RAB11FIP5Q9BXF6 653 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 PANK4Q9NVE7 773 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 PNMA2Q9UL42 364 aa4.19□□□□□ -1.74
CCDC7-207ENST00000535327 WDR37Q9Y2I8 494 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms