RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TBX18O95935 607 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 G6PDP11413 515 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 AMD1P17707 334 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 S1PR1P21453 382 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 BSGP35613 385 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 SORDQ00796 357 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 MAP2K1Q02750 393 aaPredicted RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 SYT16Q17RD7 645 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 EIF2S3LQ2VIR3 472 aaKnown RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 DEFB115Q30KQ5 88 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 ACCSLQ4AC99 568 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 KCNT1Q5JUK3 1230 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 CFAP58Q5T655 872 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 ARMC3Q5W041 872 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 HIST2H2BCQ6DN03 193 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 APOBEC3HQ6NTF7 200 aaKnown RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 SLC36A4Q6YBV0 504 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 MOB2Q70IA6 237 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 ITPRIPQ8IWB1 547 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 MUC20Q8N307 709 aaPredicted RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 UCMAQ8WVF2 138 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 RFFLQ8WZ73 363 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 WBP2Q969T9 261 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 ZUFSPQ96AP4 578 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 RRP36Q96EU6 259 aaKnown RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 CHCHD6Q9BRQ6 235 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 NDST4Q9H3R1 872 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 ANKEF1Q9NU02 776 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 TMEM30AQ9NV96 361 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 ACAD8Q9UKU7 415 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 NAALADL1Q9UQQ1 740 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 CEPT1Q9Y6K0 416 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 CAPN7Q9Y6W3 813 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 PDE4DIPQ5VU43 2346 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 GAKO14976 1311 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 A0A0G2JPF8 293 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 A0A1W2PPH5 198 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 A0A1W2PS18 150 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 CLRN2A0PK11 232 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 LILRA5A6NI73 299 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 HNRNPCL3B7ZW38 293 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 IFNL4K9M1U5 179 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 HNRNPCL1O60812 293 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 SEC31AO94979 1220 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 UMODP07911 640 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 HNRNPCL4P0DMR1 293 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 HSPA1AP0DMV8 641 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 HSPA1BP0DMV9 641 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 ANOS1P23352 680 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 PSMA4P25789 261 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 U2AF2P26368 475 aaKnown RBP eCLIP3.38□□□□□ -1.871e-7■□□□□ 11.3
USP48-215ENST00000534705 BDKRB2P30411 391 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 NLRP5P59047 1200 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 DCAF7P61962 342 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 CSNK2A1P68400 391 aaPredicted RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 OLR1P78380 273 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 KRT83P78385 493 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 ZBED6P86452 979 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 PLIN5Q00G26 463 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 ROR1Q01973 937 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 NCBP1Q09161 790 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 ZKSCAN8Q15776 578 aaPredicted RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 SOWAHCQ53LP3 525 aaPredicted RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 CAVIN4Q5BKX8 364 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 RGMBQ6NW40 437 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 C9orf139Q6ZV77 190 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 ZNF771Q7L3S4 317 aaPredicted RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 GSTA5Q7RTV2 222 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 SATL1Q86VE3 508 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 APOBEC3FQ8IUX4 373 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 C1orf87Q8N0U7 546 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 CSNK2A3Q8NEV1 391 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 OR2AK2Q8NG84 335 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 KIF18AQ8NI77 898 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 METTL6Q8TCB7 284 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 AFAP1L1Q8TED9 768 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 PSPC1Q8WXF1 523 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 RND1Q92730 232 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 GTF3C6Q969F1 213 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 DCPSQ96C86 337 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 CAPNS2Q96L46 248 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 C7orf26Q96N11 449 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 SDF4Q9BRK5 362 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 TDRD3Q9H7E2 651 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 ZNF446Q9NWS9 450 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 HMG20BQ9P0W2 317 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 ORC3Q9UBD5 711 aaPredicted RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 AASSQ9UDR5 926 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 DBNLQ9UJU6 430 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 ACSL5Q9ULC5 683 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 DDX19BQ9UMR2 479 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 GPR34Q9UPC5 381 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 CAMK2AQ9UQM7 478 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 EXOC6BQ9Y2D4 811 aa3.38□□□□□ -1.87
USP48-215ENST00000534705 COL2A1P02458 1487 aaPredicted RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 BAZ2BQ9UIF8 2168 aaKnown RBP3.38□□□□□ -1.87
USP48-215ENST00000534705 ZNF236Q9UL36 1845 aa3.37□□□□□ -1.87
USP48-215ENST00000534705 DOCK5Q9H7D0 1870 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms