RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 GPATCH11Q8N954 259 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 EIF1ADQ8N9N8 165 aaKnown RBP23.59■■□□□ 1.37
SIPA1-210ENST00000534406 ZFPM2Q8WW38 1151 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 AHCYL2Q96HN2 611 aaKnown RBP23.59■■□□□ 1.37
SIPA1-210ENST00000534406 DEPDC7Q96QD5 511 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 GPR21Q99679 349 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 TBC1D10AQ9BXI6 508 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 MVB12BQ9H7P6 319 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 CLCA2Q9UQC9 943 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 ASF1AQ9Y294 204 aa23.59■■□□□ 1.37
SIPA1-210ENST00000534406 CXorf49A8MYA2 514 aaPredicted RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 PIAS1O75925 651 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 MT-CO3P00414 261 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 C1QAP02745 245 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 TNFRSF8P28908 595 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 ILF2Q12905 390 aaKnown RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 NAB1Q13506 487 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 GBX1Q14549 363 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 KBTBD12Q3ZCT8 623 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 FAM45BPQ6NSW5 357 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 ZC3HC1Q86WB0 502 aaKnown RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 CTAGE3PQ8IX95 158 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 GSPT2Q8IYD1 628 aaKnown RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 SIDT2Q8NBJ9 832 aaKnown RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 GIMAP7Q8NHV1 300 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 FAM45AQ8TCE6 357 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 ATXN7L3BQ96GX2 97 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 FERD3LQ96RJ6 166 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 CPNE1Q99829 537 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 HGH1Q9BTY7 390 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 RHOJQ9H4E5 214 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 TAS2R13Q9NYV9 303 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 GALPQ9UBC7 116 aa23.58■■□□□ 1.37
SIPA1-210ENST00000534406 TRMT6Q9UJA5 497 aaKnown RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 ATXN7L1Q9ULK2 861 aaPredicted RBP23.58■■□□□ 1.37
SIPA1-210ENST00000534406 ACSL3O95573 720 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 CPNE6O95741 557 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 CD1CP29017 333 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 NKAIN2Q5VXU1 208 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 UGT3A1Q6NUS8 523 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 UNC5DQ6UXZ4 953 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 PPM1NQ8N819 430 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 DCBLD1Q8N8Z6 715 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 ACVR1CQ8NER5 493 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 CD200R1Q8TD46 325 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 SKA2Q8WVK7 121 aaPredicted RBP23.57■■□□□ 1.36
SIPA1-210ENST00000534406 SLC30A3Q99726 388 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 TRIT1Q9H3H1 467 aaKnown RBP23.57■■□□□ 1.36
SIPA1-210ENST00000534406 ANKZF1Q9H8Y5 726 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 SLC24A2Q9UI40 661 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 DHRS7Q9Y394 339 aa23.57■■□□□ 1.36
SIPA1-210ENST00000534406 MED19A0JLT2 244 aaPredicted RBP23.56■■□□□ 1.36
SIPA1-210ENST00000534406 UBXN7O94888 489 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 RPN2P04844 631 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 PROS1P07225 676 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 JUPP14923 745 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 CSF2RBP32927 897 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 GP5P40197 560 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 CDKN2DP55273 166 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 ACSBG2Q5FVE4 666 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 HECTD2Q5U5R9 776 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 CACTIN-AS1Q8N1I8 211 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 PHC3Q8NDX5 983 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 OR5AR1Q8NGP9 310 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 INPP5DQ92835 1189 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 VPS39Q96JC1 886 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 DPYSL5Q9BPU6 564 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 RDH14Q9HBH5 336 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 TSR3Q9UJK0 312 aaKnown RBP23.56■■□□□ 1.36
SIPA1-210ENST00000534406 WASF3Q9UPY6 502 aa23.56■■□□□ 1.36
SIPA1-210ENST00000534406 CSO75390 466 aaKnown RBP23.55■■□□□ 1.36
SIPA1-210ENST00000534406 TOP3BO95985 862 aaKnown RBP23.55■■□□□ 1.36
SIPA1-210ENST00000534406 ENO3P13929 434 aaPredicted RBP23.55■■□□□ 1.36
SIPA1-210ENST00000534406 CD9P21926 228 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 FDXRP22570 491 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 SKIV2L2P42285 1042 aaKnown RBP23.55■■□□□ 1.36
SIPA1-210ENST00000534406 CAPZBP47756 277 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 ABRQ12979 859 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 SQSTM1Q13501 440 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 EFTUD2Q15029 972 aaKnown RBP eCLIP23.55■■□□□ 1.36
SIPA1-210ENST00000534406 USP53Q70EK8 1073 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 PIM3Q86V86 326 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 TBC1D21Q8IYX1 336 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 OR5K2Q8NHB8 316 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 CFAP61Q8NHU2 1237 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 JPH3Q8WXH2 748 aaPredicted RBP23.55■■□□□ 1.36
SIPA1-210ENST00000534406 ELMO2Q96JJ3 720 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 FOPNLQ96NB1 174 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 NUDT22Q9BRQ3 303 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 KLK13Q9UKR3 277 aa23.55■■□□□ 1.36
SIPA1-210ENST00000534406 FAM95CA0A1B0GW59 222 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 FAM149AA5PLN7 773 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 CBSLP0DN79 551 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 MYBL2P10244 700 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 TYRP1P17643 537 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 AMD1P17707 334 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 CBSP35520 551 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 PDX1P52945 283 aa23.54■■□□□ 1.36
SIPA1-210ENST00000534406 PDAP1Q13442 181 aaKnown RBP23.54■■□□□ 1.36
SIPA1-210ENST00000534406 ISXQ2M1V0 245 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms