RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 NRTNQ99748 197 aa22.2■■□□□ 1.14
PKP3-210ENST00000533249 PCDHGA9Q9Y5G4 932 aaKnown RBP22.2■■□□□ 1.14
PKP3-210ENST00000533249 PCDHA13Q9Y5I0 950 aa22.2■■□□□ 1.14
PKP3-210ENST00000533249 AGAP14A8MT82 685 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 TMEM150CB9EJG8 249 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 KCNN4O15554 427 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 STK10O94804 968 aaKnown RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 RBP3P10745 1247 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 ATP1B2P14415 290 aaPredicted RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 GNLYP22749 145 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 PREPP48147 710 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 LMAN1P49257 510 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 ZNF140P52738 457 aaPredicted RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 EIF3EP60228 445 aaKnown RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 SPARCL1Q14515 664 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 SPA17Q15506 151 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 DARS2Q6PI48 645 aaKnown RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 MICALCLQ6ZW33 695 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 SNX20Q7Z614 316 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 CCDC110Q8TBZ0 833 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 KLHL25Q9H0H3 589 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 COG4Q9H9E3 785 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 LRRC4CQ9HCJ2 640 aa22.19■■□□□ 1.14
PKP3-210ENST00000533249 RP1L1Q8IWN7 2480 aaPredicted RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 SPENQ96T58 3664 aaKnown RBP22.19■■□□□ 1.14
PKP3-210ENST00000533249 SOWAHDA6NJG2 315 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 MATN2O00339 956 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 IFRD1O00458 451 aaPredicted RBP22.18■■□□□ 1.14
PKP3-210ENST00000533249 BTN3A3O00478 584 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 RAB40ALP0C0E4 278 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 ST6GAL1P15907 406 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 CYP2A7P20853 494 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 PRDX3P30048 256 aaKnown RBP22.18■■□□□ 1.14
PKP3-210ENST00000533249 HADHAP40939 763 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 COPS2P61201 443 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 MSLNQ13421 630 aaPredicted RBP22.18■■□□□ 1.14
PKP3-210ENST00000533249 PHC3Q8NDX5 983 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 ADAMTS17Q8TE56 1095 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 TBL1YQ9BQ87 522 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 NLNQ9BYT8 704 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 ACTR5Q9H9F9 607 aaPredicted RBP22.18■■□□□ 1.14
PKP3-210ENST00000533249 MLXIPLQ9NP71 852 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 TCFL5Q9UL49 500 aa22.18■■□□□ 1.14
PKP3-210ENST00000533249 SPTAN1Q13813 2472 aaKnown RBP22.18■■□□□ 1.14
PKP3-210ENST00000533249 C17orf113A0A1B0GUU1 675 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 BTN3A1O00481 513 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 PJA2O43164 708 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 PVRP15151 417 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 MC4RP32245 332 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 CTNNA1P35221 906 aaKnown RBP22.17■■□□□ 1.14
PKP3-210ENST00000533249 RORAP35398 523 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 CDKN1CP49918 316 aaPredicted RBP22.17■■□□□ 1.14
PKP3-210ENST00000533249 PTCHD3Q3KNS1 767 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 DENND5AQ6IQ26 1287 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 SYTL1Q8IYJ3 562 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 GALNT11Q8NCW6 608 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 OR52E1Q8NGJ3 308 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 HEXDCQ8WVB3 486 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 DNAJC1Q96KC8 554 aaKnown RBP22.17■■□□□ 1.14
PKP3-210ENST00000533249 SPATA13Q96N96 652 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 OSBPL8Q9BZF1 889 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 SLC7A5P2Q9GIP4 190 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 OR52A5Q9H2C5 316 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 SYTL2Q9HCH5 934 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 LUC7LQ9NQ29 371 aaKnown RBP22.17■■□□□ 1.14
PKP3-210ENST00000533249 PCMTD2Q9NV79 361 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 ZDHHC3Q9NYG2 299 aa22.17■■□□□ 1.14
PKP3-210ENST00000533249 EPN1Q9Y6I3 576 aaPredicted RBP22.17■■□□□ 1.14
PKP3-210ENST00000533249 MAP3K7O43318 606 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 TMEM63AO94886 807 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 AGFG2O95081 481 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 PDHA2P29803 388 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 ZRANB3Q5FWF4 1079 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 ZNF789Q5FWF6 425 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 FAM198BQ6UWH4 519 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 HGH1Q9BTY7 390 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 XKR8Q9H6D3 395 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 LUZP4Q9P127 313 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 SERTAD3Q9UJW9 196 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 ZNF451Q9Y4E5 1061 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 PCDHA3Q9Y5H8 950 aa22.16■■□□□ 1.14
PKP3-210ENST00000533249 SPTBN1Q01082 2364 aaKnown RBP22.15■■□□□ 1.14
PKP3-210ENST00000533249 A6NL46 340 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 ZNF185O15231 689 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 LDB2O43679 373 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 CAPN1P07384 714 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 PRSS56P0CW18 603 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 ITGA1P56199 1179 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 CCZ1BP86790 482 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 CCZ1P86791 482 aaPredicted RBP22.15■■□□□ 1.14
PKP3-210ENST00000533249 PRKG2Q13237 762 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 GPR33Q49SQ1 333 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 PAPD7Q5XG87 772 aaKnown RBP22.15■■□□□ 1.14
PKP3-210ENST00000533249 ZNF449Q6P9G9 518 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 TAS2R42Q7RTR8 314 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 SERPINA9Q86WD7 417 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 TMEM139Q8IV31 216 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 FDCSPQ8NFU4 85 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 TRAPPC9Q96Q05 1148 aa22.15■■□□□ 1.14
PKP3-210ENST00000533249 MFRPQ9BY79 579 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms