RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CCNT2O60583 730 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 TSPAN2O60636 221 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 UGT1A9O60656 530 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CDC14BO60729 498 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ATP2C2O75185 946 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SEC22BO75396 215 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TIPRLO75663 272 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 OR6B1O95007 311 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 OTCP00480 354 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 UGT2B4P06133 528 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 FABP1P07148 127 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CHRM5P08912 532 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 HOXD4P09016 255 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 FAM58BPP0C7Q3 252 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CDH1P12830 882 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 COX4I1P13073 169 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 MTHFD2P13995 350 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 PRF1P14222 555 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 UGT1A6P19224 532 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TNNI1P19237 187 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 HLA-DPA1P20036 260 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ABCB4P21439 1286 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CTSSP25774 331 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CD40LGP29965 261 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ERP29P30040 261 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 CHRNA5P30532 468 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 APOBEC3AP31941 199 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 HSD17B3P37058 310 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 PSMD8P48556 350 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 DIO1P49895 249 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 HLCSP50747 726 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 NKX2-5P52952 324 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 DRG2P55039 364 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 SESN2P58004 480 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 RAC3P60763 192 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 YWHAZP63104 245 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 HTD2P86397 168 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GLO1Q04760 184 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 PRKCZQ05513 592 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GALNT2Q10471 571 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CHAF1BQ13112 559 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 DUSP8Q13202 625 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GRM1Q13255 1194 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ZNF177Q13360 481 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 SLC39A6Q13433 755 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 FZD5Q13467 585 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 EFR3AQ14156 821 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GALEQ14376 348 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 PDK2Q15119 407 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 LRRC41Q15345 812 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TYSND1Q2T9J0 566 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TMEM44Q2T9K0 475 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SMTNL2Q2TAL5 461 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GXYLT1Q4G148 440 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 IQCCQ4KMZ1 466 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 EPC2Q52LR7 807 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ACSBG2Q5FVE4 666 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 PDSS1Q5T2R2 415 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 LRRC66Q68CR7 880 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 DPY19L2P1Q6NXN4 242 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 WDR73Q6P4I2 378 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 DARS2Q6PI48 645 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 FOXR2Q6PJQ5 311 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 CLEC2AQ6UVW9 174 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ZNF852Q6ZMS4 543 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 RNF207Q6ZRF8 634 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 FAM47EQ6ZV65 393 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TTLL10Q6ZVT0 673 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GALNTL5Q7Z4T8 443 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GPAT4Q86UL3 456 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ADGRG3Q86Y34 549 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 ARMC8Q8IUR7 673 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GID4Q8IVV7 300 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SLC35F3Q8IY50 421 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GRAMD1CQ8IYS0 662 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SYCE1Q8N0S2 351 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 EIF4E3Q8N5X7 224 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 LILRA3Q8N6C8 439 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 KDM1BQ8NB78 822 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SLC37A3Q8NCC5 494 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 GLG1Q92896 1179 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TMBIM1Q969X1 311 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 TRIM43Q96BQ3 446 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 CYTH2Q99418 400 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SORT1Q99523 831 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 SEC22CQ9BRL7 303 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 LRRC1Q9BTT6 524 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 MRPL37Q9BZE1 423 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 BCL2L14Q9BZR8 327 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 BLZF1Q9H2G9 400 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 C12orf65Q9H3J6 166 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 C14orf93Q9H972 538 aaKnown RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 GPN2Q9H9Y4 310 aaPredicted RBP5.42□□□□□ -1.54
CD44-236ENST00000533222 UGT1A7Q9HAW7 530 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 UGT1A10Q9HAW8 530 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 UGT1A8Q9HAW9 530 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 EPB41L5Q9HCM4 733 aa5.42□□□□□ -1.54
CD44-236ENST00000533222 RPRD1BQ9NQG5 326 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms