RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 VARS2Q5ST30 1063 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 GLYATQ6IB77 296 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CES3Q6UWW8 571 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 AHSA2Q719I0 299 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RTN4RL1Q86UN2 441 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PROSER1Q86XN7 944 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 LACC1Q8IV20 430 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SAMD14Q8IZD0 417 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 DCP1BQ8IZD4 617 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 UNC5BQ8IZJ1 945 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SCAMP5Q8TAC9 235 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 POF1BQ8WVV4 589 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 STON2Q8WXE9 905 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 MYLPFQ96A32 169 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CLPBQ9H078 707 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF556Q9HAH1 456 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CCM2LQ9NUG4 571 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 DDIT4Q9NX09 232 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TJP2Q9UDY2 1190 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CFL2Q9Y281 166 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 HMX3A6NHT5 357 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CXorf49A8MYA2 514 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CD3EAPO15446 510 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 INMTO95050 263 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TCF4P15884 667 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 DDCP20711 480 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PROZP22891 400 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PNPLA4P41247 253 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CDKN2BP42772 138 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 MTHFRP42898 656 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 AP2S1P53680 142 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ITGA1P56199 1179 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SRP54P61011 504 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 MLLT1Q03111 559 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 DBPQ10586 325 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SIM2Q14190 667 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 POU6F1Q14863 301 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CLLU1OSQ5K130 101 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SPANXN3Q5MJ09 141 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 LCN1P1Q5VSP4 162 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 IL31Q6EBC2 164 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TRMT10BQ6PF06 316 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TPGS1Q6ZTW0 290 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TAS1R1Q7RTX1 841 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FCGR1BQ92637 280 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TSPAN17Q96FV3 270 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF641Q96N77 438 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC30A2Q9BRI3 323 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 COPS4Q9BT78 406 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CDADC1Q9BWV3 514 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 C14orf119Q9NWQ9 140 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 NUFIP1Q9UHK0 495 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TMCC3Q9ULS5 477 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 AP3M1Q9Y2T2 418 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 INSL6Q9Y581 213 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 A0A0J9YYE9 177 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM92AA1XBS5 289 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PTGESO14684 152 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ERN1O75460 977 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PSIP1O75475 530 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ATP6AP2O75787 350 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FGF18O76093 207 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SLITRK5O94991 958 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 VNN1O95497 513 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 C2P06681 752 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ANXA6P08133 673 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 NUP62P37198 522 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CTSKP43235 329 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 NRIP1P48552 1158 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 WDR5P61964 334 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 NCS1P62166 190 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CRADDP78560 199 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PIGFQ07326 219 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TP53BP2Q13625 1128 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 GALNT3Q14435 633 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PSRC1Q6PGN9 363 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RNF111Q6ZNA4 994 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 COMMD7Q86VX2 200 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 B3GALNT2Q8NCR0 500 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FBXO22Q8NEZ5 403 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC35B2Q8TB61 432 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF431Q8TF32 576 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC22A17Q8WUG5 538 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 DNAJA4Q8WW22 397 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TESCQ96BS2 214 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CERS2Q96G23 380 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FEM1CQ96JP0 617 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 KCNS3Q9BQ31 491 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ULBP1Q9BZM6 244 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 POMKQ9H5K3 350 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 IL23AQ9NPF7 189 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ACSS2Q9NR19 701 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 NDFIP2Q9NV92 336 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PIH1D1Q9NWS0 290 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 NPAP1Q9NZP6 1156 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TCAF1Q9Y4C2 921 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 LYVE1Q9Y5Y7 322 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TCRBV7S3A2A0A539 114 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms