RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TMEM114B3SHH9 223 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 PPP6CO00743 305 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 TAPBPO15533 448 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 FFAR2O15552 330 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 H2AFYO75367 372 aaKnown RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 GUCA1CO95843 209 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 KITP10721 976 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 TSPAN8P19075 237 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 BCKDHBP21953 392 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 NUDT1P36639 197 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 HERVK_113P63132 956 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 RCN2Q14257 317 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 ZXDCQ2QGD7 858 aaPredicted RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 SYTL3Q4VX76 610 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 NEK10Q6ZWH5 1172 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 GLMNQ92990 594 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 SCARF2Q96GP6 870 aaPredicted RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 ZC3H10Q96K80 434 aaKnown RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 NSUN5Q96P11 429 aaKnown RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 SLC12A9Q9BXP2 914 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 ERVK-6Q9BXR3 956 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 KCNK13Q9HB14 408 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 FGF22Q9HCT0 170 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 TNFRSF12AQ9NP84 129 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 NPHS2Q9NP85 383 aa21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 MARCOQ9UEW3 520 aaPredicted RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.47■■□□□ 1.03
PACSIN3-209ENST00000532457 GON4LQ3T8J9 2241 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 SCAMP1O15126 338 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 AKT2P31751 481 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 CDH13P55290 713 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 UBE2R2Q712K3 238 aaPredicted RBP21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 SPATA21Q7Z572 469 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 AMZ2Q86W34 360 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 TMEFF1Q8IYR6 380 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 CFAP61Q8NHU2 1237 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 SREK1Q8WXA9 508 aaKnown RBP21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 NSRP1Q9H0G5 558 aaKnown RBP21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 SUFUQ9UMX1 484 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 DNAJC16Q9Y2G8 782 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 ST14Q9Y5Y6 855 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 HS3ST3A1Q9Y663 406 aa21.46■■□□□ 1.03
PACSIN3-209ENST00000532457 METTL12A8MUP2 240 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 CACNB4O00305 520 aaPredicted RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 UBFD1O14562 309 aaKnown RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 LIN7AO14910 233 aaPredicted RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 NPHS1O60500 1241 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 EEF1DP29692 281 aaKnown RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 ALDH18A1P54886 795 aaKnown RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 PLK5Q496M5 336 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 PYCR3Q53H96 274 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 PMS2CLQ68D20 193 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 OXR1Q8N573 874 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 ZNF781Q8N8C0 355 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 SPDYE1Q8NFV5 336 aaPredicted RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 CNDP1Q96KN2 507 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 RDH14Q9HBH5 336 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 NUDT4Q9NZJ9 180 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 ZDHHC2Q9UIJ5 367 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 PTBP2Q9UKA9 531 aaKnown RBP21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 R4GN57 208 aa21.45■■□□□ 1.03
PACSIN3-209ENST00000532457 KMOO15229 486 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 SUPT7LO94864 414 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 TGDSO95455 350 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 HSPA4LO95757 839 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 MPSTP25325 297 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 RPIAP49247 311 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 KIAA1024LP59773 190 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 SETDB1Q15047 1291 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 CCSMST1Q4G0I0 132 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 CFAP157Q5JU67 520 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 PRR23BQ6ZRT6 265 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 Q6ZSR6 202 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 FRMD7Q6ZUT3 714 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 FRA10AC1Q70Z53 315 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 CHST15Q7LFX5 561 aaPredicted RBP21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 CRLF3Q8IUI8 442 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 HM13Q8TCT9 377 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 OR1E3Q8WZA6 343 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 ATOH1Q92858 354 aaPredicted RBP21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 GRAMD1AQ96CP6 724 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 PARVBQ9HBI1 364 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 RAB23Q9ULC3 237 aa21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 DNMT3AQ9Y6K1 912 aaPredicted RBP21.45■■□□□ 1.02
PACSIN3-209ENST00000532457 CACNA1HO95180 2353 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 MEI4A8MW99 385 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 GPR89AB7ZAQ6 455 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 PRAMEF26H0Y7S4 382 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 PSIP1O75475 530 aaKnown RBP21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 C8GP07360 202 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 GPR89BP0CG08 455 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 ASPHQ12797 758 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 NFATC4Q14934 902 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 WDR45BQ5MNZ6 344 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 GKAP1Q5VSY0 366 aaPredicted RBP21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 ENPP7Q6UWV6 458 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 ABI3BPQ7Z7G0 1075 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 PDPRQ8NCN5 879 aa21.44■■□□□ 1.02
PACSIN3-209ENST00000532457 OR13H1Q8NG92 308 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms