RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 STYXQ8WUJ0 223 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 THAP4Q8WY91 577 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 CDKN2AIPNLQ96HQ2 116 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 LRFN5Q96NI6 719 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 TLR10Q9BXR5 811 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 FANCEQ9HB96 536 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 TLK1Q9UKI8 766 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 PACSIN2Q9UNF0 486 aaPredicted RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 FARSAQ9Y285 508 aaKnown RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 SPENQ96T58 3664 aaKnown RBP16.34■□□□□ 0.21
CPSF1-207ENST00000531727 BTN3A1O00481 513 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 DDX3YO15523 660 aaKnown RBP16.34■□□□□ 0.21
CPSF1-207ENST00000531727 PSMD3O43242 534 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 AP2A1O95782 977 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 GSTM1P09488 218 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 MSL3P1P0C860 447 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 PDHA2P29803 388 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 PRDX3P30048 256 aaKnown RBP16.34■□□□□ 0.21
CPSF1-207ENST00000531727 GSDMDP57764 484 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 GSTM4Q03013 218 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 CACNG1Q06432 222 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 ABRQ12979 859 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 SEMA5AQ13591 1074 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 IGFBP7Q16270 282 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 DBN1Q16643 649 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 IZUMO3Q5VZ72 239 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 ASB18Q6ZVZ8 466 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 PIANPQ8IYJ0 282 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 CLDN19Q8N6F1 224 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 SLC38A9Q8NBW4 561 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 PHC3Q8NDX5 983 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 SLC35B2Q8TB61 432 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 MR1Q95460 341 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 BAG1Q99933 345 aaPredicted RBP16.34■□□□□ 0.21
CPSF1-207ENST00000531727 TMEM121Q9BTD3 319 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 PITPNM3Q9BZ71 974 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 TFB2MQ9H5Q4 396 aaKnown RBP16.34■□□□□ 0.21
CPSF1-207ENST00000531727 MVB12BQ9H7P6 319 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 SYTL2Q9HCH5 934 aa16.34■□□□□ 0.21
CPSF1-207ENST00000531727 R3HDM2Q9Y2K5 976 aaKnown RBP16.34■□□□□ 0.21
CPSF1-207ENST00000531727 BTN3A3O00478 584 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 AP2A2O94973 939 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 FTCDO95954 541 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.2
CPSF1-207ENST00000531727 ST6GAL1P15907 406 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 PSMA3P25788 255 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 PREPP48147 710 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 GDF10P55107 478 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 KIF5AQ12840 1032 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 IL10RAQ13651 578 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.2
CPSF1-207ENST00000531727 COLEC12Q5KU26 742 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 AMIGO1Q86WK6 493 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 TMEM139Q8IV31 216 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 DSELQ8IZU8 1212 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 TXLNBQ8N3L3 684 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 OR52E1Q8NGJ3 308 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 CPT1BQ92523 772 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 TFGQ92734 400 aaPredicted RBP16.33■□□□□ 0.2
CPSF1-207ENST00000531727 ALS2CR12Q96Q35 445 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 CHST8Q9H2A9 424 aa16.33■□□□□ 0.2
CPSF1-207ENST00000531727 PIH1D1Q9NWS0 290 aaKnown RBP16.33■□□□□ 0.2
CPSF1-207ENST00000531727 TCRBV7S2A1N4TA0A589 114 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 MROH6A6NGR9 719 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 C2orf74A8MZ97 194 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 MEN1O00255 615 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 MAP3K7O43318 606 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 NSG1P42857 185 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 PLEKHS1Q5SXH7 462 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 PRAMEF17Q5VTA0 474 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 TEX19Q8NA77 164 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 OR1L3Q8NH93 324 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 CLIP3Q96DZ5 547 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 NRTNQ99748 197 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 HGH1Q9BTY7 390 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 TRIM55Q9BYV6 548 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
CPSF1-207ENST00000531727 A0A0U1RQJ8 604 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 CCDC78A2IDD5 438 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 TMEM150CB9EJG8 249 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 QSOX1O00391 747 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-207ENST00000531727 DNAJB5O75953 348 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 PDGFAP04085 211 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 RAB40ALP0C0E4 278 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 CYP2A7P20853 494 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
CPSF1-207ENST00000531727 RORAP35398 523 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 PRKG2Q13237 762 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 ITIH4Q14624 930 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 ZNF789Q5FWF6 425 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 CPZQ66K79 652 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 LCN10Q6JVE6 187 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 PACS1Q6VY07 963 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 LINC00523Q86TU6 105 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 TAB3Q8N5C8 712 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-207ENST00000531727 HES6Q96HZ4 224 aa16.31■□□□□ 0.2
CPSF1-207ENST00000531727 TRAPPC9Q96Q05 1148 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms