RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LRRTM4Q86VH4 590 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 SAAL1Q96ER3 474 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 MMABQ96EY8 250 aaPredicted RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 TRAF4Q9BUZ4 470 aaPredicted RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 RANBP17Q9H2T7 1088 aaKnown RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 TSPY26PQ9H489 355 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 SUDS3Q9H7L9 328 aaPredicted RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 SAGE1Q9NXZ1 904 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 C9orf78Q9NZ63 289 aaPredicted RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 PDP2Q9P2J9 529 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 FBXW11Q9UKB1 542 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 TBX20Q9UMR3 447 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 A0A1B0GVC2 190 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 FAM170AA1A519 330 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 SRRM5B3KS81 715 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 J3QR06 171 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 IDH3BO43837 385 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 H1F0P07305 194 aaKnown RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 ACP2P11117 423 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 ARL1P40616 181 aaPredicted RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 PAFAH1B1P43034 410 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 EIF3BP55884 814 aaKnown RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 HUNKP57058 714 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 GSDMDP57764 484 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 PTP4A2Q12974 167 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 CCDC184Q52MB2 194 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 LRIF1Q5T3J3 769 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 KLC3Q6P597 504 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 PTAR1Q7Z6K3 402 aaPredicted RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 TBC1D1Q86TI0 1168 aaPredicted RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 LACC1Q8IV20 430 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 OR5AP2Q8NGF4 316 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 OR1J1Q8NGS3 322 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 MIPOL1Q8TD10 442 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 CENPTQ96BT3 561 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 CDHR1Q96JP9 859 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 UBXN10Q96LJ8 280 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 MYADMQ96S97 322 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 KRT12Q99456 494 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 PUS3Q9BZE2 481 aaKnown RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 WWTR1Q9GZV5 400 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 EPB41L5Q9HCM4 733 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 RANGRFQ9HD47 186 aaPredicted RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 PCDHB16Q9NRJ7 776 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 SMC3Q9UQE7 1217 aa3.55□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF646O15015 1829 aaPredicted RBP3.55□□□□□ -1.84
PTPRK-220ENST00000531466 RAD54L2Q9Y4B4 1467 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 MSGN1A6NI15 193 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 EIF3FO00303 357 aaPredicted RBP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 PES1O00541 588 aaKnown RBP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 KLF11O14901 512 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 RNASEH2AO75792 299 aaKnown RBP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 GPIP06744 558 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 CCDC159P0C7I6 412 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 OPRL1P41146 370 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 PSMC4P43686 418 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 GSCP56915 257 aaPredicted RBP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 DLK1P80370 383 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 WASHC5Q12768 1159 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 TMED1Q13445 227 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 SEL1L3Q68CR1 1132 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 CDC73Q6P1J9 531 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF534Q76KX8 674 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF554Q86TJ5 538 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 HOGA1Q86XE5 327 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 NDUFAF2Q8N183 169 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 Q8N7P7 452 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 Q8NBF4 154 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 HSD17B8Q92506 261 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 DYRK2Q92630 601 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 SLCO2A1Q92959 643 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 ERP27Q96DN0 273 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 ALDH8A1Q9H2A2 487 aaPredicted RBP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 MTMR10Q9NXD2 777 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 TUBE1Q9UJT0 475 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 PPP1R3CQ9UQK1 317 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 R3HDM2Q9Y2K5 976 aaKnown RBP3.54□□□□□ -1.84
PTPRK-220ENST00000531466 RIPK3Q9Y572 518 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 ANGPTL3Q9Y5C1 460 aa3.54□□□□□ -1.84
PTPRK-220ENST00000531466 ABCA7Q8IZY2 2146 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 PHOX2AO14813 284 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 KIF5CO60282 957 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 RPN1P04843 607 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 MAPK9P45984 424 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 CD151P48509 253 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF131P52739 623 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 NAP1L1P55209 391 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 TAS2R40P59535 323 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 ZBED6P86452 979 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 FRG1Q14331 258 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 MVPQ14764 893 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 INTS11Q5TA45 600 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
PTPRK-220ENST00000531466 NAXEQ8NCW5 288 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 C17orf47Q8NEP4 570 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 GSDMBQ8TAX9 411 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF519Q8TB69 540 aa3.53□□□□□ -1.84
PTPRK-220ENST00000531466 ITFG2Q969R8 447 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms