RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 MGAT4CQ9UBM8 478 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 MOSPD1Q9UJG1 213 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 TINAGQ9UJW2 476 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 STOML2Q9UJZ1 356 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 RPS6KA6Q9UK32 745 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GINS2Q9Y248 185 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ASB4Q9Y574 426 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 HMGXB3Q12766 1538 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GPATCH8Q9UKJ3 1502 aaKnown RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 RAPGEF2Q9Y4G8 1499 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ADCY9O60503 1353 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 KAT6AQ92794 2004 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 MN1Q10571 1320 aaPredicted RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 MYH11P35749 1972 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 PQLC2LA1A4F0 135 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 UBE2Q2LH0YL09 131 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 H3BNC9 293 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 EEF2KO00418 725 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 RASGRF2O14827 1237 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 SNX3O60493 162 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ATG13O75143 517 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 RBMXL2O75526 392 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 BCAR3O75815 825 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 WDR47O94967 919 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 CLPTM1O96005 669 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 MT-ND3P03897 115 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 PGK2P07205 417 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 HEXBP07686 556 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TMEM225BP0DP42 221 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 MYL6BP14649 208 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 GJA1P17302 382 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TFEBP19484 476 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ITIH1P19827 911 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TCEA1P23193 301 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 GALNSP34059 522 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 DIO1P49895 249 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 MYL6P60660 151 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 PRAMEP78395 509 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 PSG6Q00889 435 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 CFHR3Q02985 330 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TFF2Q03403 129 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 LMAN2Q12907 356 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 CDC16Q13042 620 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 MTAPQ13126 283 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 FHL3Q13643 280 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 SAPCD1Q5SSQ6 148 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 HES5Q5TA89 166 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ARHGEF16Q5VV41 709 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 XKRXQ6PP77 449 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 CLEC9AQ6UXN8 241 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 LRRC74BQ6ZQY2 392 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 BCDIN3DQ7Z5W3 292 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 ANKS1BQ7Z6G8 1248 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 GPBP1Q86WP2 473 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ZNF575Q86XF7 245 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 RASGRP3Q8IV61 690 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 RNF113BQ8IZP6 322 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 ZNF619Q8N2I2 560 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 CENPSQ8N2Z9 138 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 FSTL5Q8N475 847 aaPredicted RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 ARFGAP1Q8N6T3 406 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 GLIS1Q8NBF1 620 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 C7orf57Q8NEG2 295 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 IPMKQ8NFU5 416 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 RAB3IL1Q8TBN0 382 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 SPPL3Q8TCT6 385 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 MGARPQ8TDB4 240 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 NTN5Q8WTR8 489 aaPredicted RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 OVCA2Q8WZ82 227 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 NXPE2Q96DL1 559 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TMEM41AQ96HV5 264 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ZBED3Q96IU2 234 aaPredicted RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 FAR2Q96K12 515 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 AK8Q96MA6 479 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ZIM3Q96PE6 472 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 PIP5K1AQ99755 562 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 DDX50Q9BQ39 737 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 GPR61Q9BZJ8 451 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 DCLK3Q9C098 648 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 CIPCQ9C0C6 399 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 HOXD1Q9GZZ0 328 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 WDR6Q9NNW5 1121 aaKnown RBP5.55□□□□□ -1.52
CD44-231ENST00000531110 NUDT15Q9NV35 164 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 EXD2Q9NVH0 621 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 DACT1Q9NYF0 836 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 RRN3Q9NYV6 651 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TAS2R1Q9NYW7 299 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 WWOXQ9NZC7 414 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 FLRT1Q9NZU1 646 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 SH3BP4Q9P0V3 963 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 FBXO40Q9UH90 709 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 TUBE1Q9UJT0 475 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 GAB2Q9UQC2 676 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ENTPD4Q9Y227 616 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ARL2BPQ9Y2Y0 163 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 SAR1BQ9Y6B6 198 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ADGBQ8N7X0 1667 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 FGD6Q6ZV73 1430 aa5.55□□□□□ -1.52
CD44-231ENST00000531110 ANKARQ7Z5J8 1434 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms