RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 LAMB3Q13751 1172 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 NCF4Q15080 339 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 PRR30Q53SZ7 412 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 PLEKHS1Q5SXH7 462 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 C11orf63Q6NUN7 778 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 SARM1Q6SZW1 724 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 TAS2R42Q7RTR8 314 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 RAB43Q86YS6 212 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 RNF214Q8ND24 703 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 SSC4DQ8WTU2 575 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 HEXDCQ8WVB3 486 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 KRT35Q92764 455 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 LINC00615Q96LM1 132 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 LRFN5Q96NI6 719 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 FAM118BQ9BPY3 351 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 TBL1YQ9BQ87 522 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 GORASP1Q9BQQ3 440 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 NLNQ9BYT8 704 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 XKR8Q9H6D3 395 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 COG4Q9H9E3 785 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 PCMTD2Q9NV79 361 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 IRAK4Q9NWZ3 460 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 GPR83Q9NYM4 423 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 PLEKHB1Q9UF11 243 aaPredicted RBP15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 SERTAD3Q9UJW9 196 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 PADI2Q9Y2J8 665 aa15.36■□□□□ 0.05
CHMP4A-204ENST00000530996 C2orf74A8MZ97 194 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 SORBS2O94875 1100 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 ATP1B2P14415 290 aaPredicted RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 PTMSP20962 102 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 OTX2P32243 289 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 MC4RP32245 332 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 HADHAP40939 763 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 EIF3EP60228 445 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 OTUD4Q01804 1114 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 TCEAL1Q15170 157 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 INPP5JQ15735 1006 aaPredicted RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 DARS2Q6PI48 645 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 SNX20Q7Z614 316 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 GPR135Q8IZ08 494 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 FDCSPQ8NFU4 85 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 OR52E1Q8NGJ3 308 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 ACTL9Q8TC94 416 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 DNAJC1Q96KC8 554 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 NUDT9Q9BW91 350 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 SYTL2Q9HCH5 934 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 LUC7LQ9NQ29 371 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 CASS4Q9NQ75 786 aa15.35■□□□□ 0.05
CHMP4A-204ENST00000530996 A1L4Q6 167 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 BTN3A3O00478 584 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 PJA2O43164 708 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 SGTAO43765 313 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 AGXTP21549 392 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 PRDX3P30048 256 aaKnown RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 ADRA1AP35348 466 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 RORAP35398 523 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 HADHBP55084 474 aaKnown RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 XIAPP98170 497 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 PRKG2Q13237 762 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 SPARCL1Q14515 664 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 SPA17Q15506 151 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 DEFB110Q30KQ9 67 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 SYTL3Q4VX76 610 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 ANKRD20A2Q5SQ80 823 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 ANKRD20A1Q5TYW2 823 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 ANKRD20A3Q5VUR7 823 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 JMJD6Q6NYC1 403 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 ZNF517Q6ZMY9 492 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 MED25Q71SY5 747 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 TRIM73Q86UV7 250 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 AMIGO1Q86WK6 493 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 TMEM102Q8N9M5 508 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 PHC3Q8NDX5 983 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 CCDC110Q8TBZ0 833 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 ADAMTS17Q8TE56 1095 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 PPP1R2P1Q96PQ5 205 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 MVB12BQ9H7P6 319 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 GPN3Q9UHW5 284 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 TFR2Q9UP52 801 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 MAP4K5Q9Y4K4 846 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 PCDHGB7Q9Y5F8 929 aa15.34■□□□□ 0.05
CHMP4A-204ENST00000530996 USP9YO00507 2555 aaPredicted RBP15.33■□□□□ 0.05
CHMP4A-204ENST00000530996 ZNF749O43361 778 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 HBQ1P09105 142 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 RBP3P10745 1247 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 ACRV1P26436 265 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 SLC6A19Q695T7 634 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 RANBP10Q6VN20 620 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 CDHR3Q6ZTQ4 885 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 SERPINA9Q86WD7 417 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 C19orf47Q8N9M1 422 aaKnown RBP15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 SPATA13Q96N96 652 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 NRTNQ99748 197 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 PITPNM3Q9BZ71 974 aa15.33■□□□□ 0.04
CHMP4A-204ENST00000530996 OR52A5Q9H2C5 316 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms