RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ATP6V1E2Q96A05 226 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 VMP1Q96GC9 406 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 TMEM19Q96HH6 336 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 GBP5Q96PP8 586 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 SPAG5Q96R06 1193 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 EPYCQ99645 322 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 EGFL8Q99944 293 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 TUBA1CQ9BQE3 449 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 SEMA6AQ9H2E6 1030 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 SLA2Q9H6Q3 261 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 EVA1AQ9H8M9 152 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 KLHL9Q9P2J3 617 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 RHCGQ9UBD6 479 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 AMDHD2Q9Y303 409 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 NME7Q9Y5B8 376 aa4.38□□□□□ -1.71
C11orf88-204ENST00000529661 A0A1W2PPQ1 181 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF587BE7ETH6 402 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 TRIM77I1YAP6 450 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 KRT86O43790 486 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SYNCRIPO60506 623 aaKnown RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SIX3O95343 332 aaPredicted RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 MYOD1P15172 320 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 GM2AP17900 193 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 MUTP22033 750 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 DGKAP23743 735 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 TMPOP42166 694 aaKnown RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 NPY4RP50391 375 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 KRT81Q14533 505 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 C6orf136Q5SQH8 315 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 GCNT6Q5T4J0 391 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 CAVIN1Q6NZI2 390 aaKnown RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 GFRALQ6UXV0 394 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF704Q6ZNC4 412 aaPredicted RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 USP43Q70EL4 1123 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SATL1Q86VE3 508 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 OR52I2Q8NH67 350 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SETD6Q8TBK2 473 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SMPDL3BQ92485 455 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 CD101Q93033 1021 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 FAM162AQ96A26 154 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SLAMF9Q96A28 289 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 NODALQ96S42 347 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 DESI2Q9BSY9 194 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 LRMDAQ9H2I8 198 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 LRRC4Q9HBW1 653 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 XAB2Q9HCS7 855 aaKnown RBP4.37□□□□□ -1.71
C11orf88-204ENST00000529661 ABCF3Q9NUQ8 709 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 NPAP1Q9NZP6 1156 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 SLC24A2Q9UI40 661 aa4.37□□□□□ -1.71
C11orf88-204ENST00000529661 ZCWPW2A0A1B0GU75 182 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 PRSS51A0A1B0GVH4 220 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 OR5K3A6NET4 321 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ANXA2P2A6NMY6 339 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ANKRD66B4E2M5 251 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 H0Y626 953 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 PSMD14O00487 310 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 SLC7A4O43246 635 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 XPNPEP2O43895 674 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 OR10H2O60403 315 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 LDLRP01130 860 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 PENKP01210 267 aaPredicted RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 OR2T7P0C7T2 308 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 TCEA1P23193 301 aaKnown RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 CTNNA1P35221 906 aaKnown RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 MTHFRP42898 656 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ARCN1P48444 511 aaKnown RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 EEF1A1P68104 462 aaKnown RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 SLC20A2Q08357 652 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ACSM1Q08AH1 577 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ILF3Q12906 894 aaKnown RBP eCLIP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF234Q14588 700 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 GFI1BQ5VTD9 330 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 EEF1A1P5Q5VTE0 462 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 C11orf88Q6PI97 169 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 C9orf139Q6ZV77 190 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF771Q7L3S4 317 aaPredicted RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 TMEM219Q86XT9 240 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 MFN1Q8IWA4 741 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 MAB21L3Q8N8X9 362 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 KCNH5Q8NCM2 988 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 EXT2Q93063 718 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 CDCA5Q96FF9 252 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF582Q96NG8 517 aaPredicted RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 FEVQ99581 238 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 CITED2Q99967 270 aaPredicted RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 THUMPD3Q9BV44 507 aaKnown RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 RSPH9Q9H1X1 276 aaPredicted RBP4.36□□□□□ -1.71
C11orf88-204ENST00000529661 MDFICQ9P1T7 246 aa4.36□□□□□ -1.71
C11orf88-204ENST00000529661 TAF1P21675 1872 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 C5orf60A6NFR6 353 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 C15orf62A8K5M9 175 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 BMPR1BO00238 502 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 BUD23O43709 281 aaKnown RBP4.35□□□□□ -1.71
C11orf88-204ENST00000529661 LMX1BO60663 402 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 BMP10O95393 424 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms