RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ARTNQ5T4W7 220 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 GLMNQ92990 594 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 POLR3HQ9Y535 204 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ASB1Q9Y576 335 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 PDCD11Q14690 1871 aaKnown RBP12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TRIOBPQ9H2D6 2365 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 MUSKO15146 869 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 DFNA5O60443 496 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TSPAN3O60637 253 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 SLC2A4P14672 509 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 CDKN1CP49918 316 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-208ENST00000527323 HTR6P50406 440 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 IL5RAQ01344 420 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ILF2Q12905 390 aaKnown RBP12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TUSC3Q13454 348 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 CTU2Q2VPK5 515 aaKnown RBP12.3□□□□□ -0.44
CAPN1-208ENST00000527323 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 OR7A2PQ8NGA2 310 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 EEF1AKMT1Q8WVE0 214 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 LINGO1Q96FE5 620 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 SLC47A1Q96FL8 570 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ALPK1Q96QP1 1244 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ZBTB18Q99592 522 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TMEM248Q9NWD8 314 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 GIN1Q9NXP7 522 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ZMYM5Q9UJ78 669 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TLR6Q9Y2C9 796 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 GIT1Q9Y2X7 761 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
CAPN1-208ENST00000527323 E5RI56 91 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 STX16O14662 325 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CNOT3O75175 753 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 NIPSNAP2O75323 286 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 SLC11A1P49279 550 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 KPNA1P52294 538 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 IL2P60568 153 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ACVR1Q04771 509 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 IL10RBQ08334 325 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 EPS8Q12929 822 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 PWP1Q13610 501 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CBX2Q14781 532 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF583Q96ND8 569 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 RBM4BQ9BQ04 359 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 RBM4Q9BWF3 364 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 PCDH12Q9NPG4 1184 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CXXC1Q9P0U4 656 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 FNIP2Q9P278 1114 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 UTS2RQ9UKP6 389 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 LOC100130705A0A1B0GUX0 176 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 XPNPEP2O43895 674 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 PRKD3O94806 890 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 NADKO95544 446 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CNPP09543 421 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 HPCAL1P37235 193 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 NRG1Q02297 640 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 SETMARQ53H47 684 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CCDC81Q6ZN84 652 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 GLT6D1Q7Z4J2 308 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ADCK1Q86TW2 530 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 DPP10Q8N608 796 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 TEX26Q8N6G2 289 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ATP6V0D2Q8N8Y2 350 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 FRS2Q8WU20 508 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 FKBP10Q96AY3 582 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ISG20Q96AZ6 181 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ITPKCQ96DU7 683 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 MBOAT4Q96T53 435 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 SPON2Q9BUD6 331 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 OSBPL10Q9BXB5 764 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 WDR12Q9GZL7 423 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 CERS4Q9HA82 394 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 SMPD4Q9NXE4 827 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 VAPAQ9P0L0 249 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 C3orf18Q9UK00 162 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 TDRD15B5MCY1 1934 aaKnown RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF99A8MXY4 864 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-208ENST00000527323 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 OR1I1O60431 355 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 HPRP00739 348 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 HTR1AP08908 422 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 GGT5P36269 586 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 HK3P52790 923 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 DNASE1L3Q13609 305 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 ZRANB3Q5FWF4 1079 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 RTP2Q5QGT7 225 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 LETMD1Q6P1Q0 360 aa12.29□□□□□ -0.44
CAPN1-208ENST00000527323 NECAB2Q7Z6G3 386 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms