RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CEPT1Q9Y6K0 416 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 KANSL1LA0AUZ9 987 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 K7EPI3 171 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 IFRD1O00458 451 aaPredicted RBP17.23■□□□□ 0.35
USH1C-205ENST00000527020 EI24O14681 340 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 SERPINA4P29622 427 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
USH1C-205ENST00000527020 LRRC66Q68CR7 880 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 GLYATQ6IB77 296 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 RIMKLAQ8IXN7 391 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 BPIFB1Q8TDL5 484 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 MRPS31Q92665 395 aaKnown RBP17.23■□□□□ 0.35
USH1C-205ENST00000527020 TMIGD2Q96BF3 282 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 ECHDC3Q96DC8 303 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 SEPHS2Q99611 448 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 HAUS8Q9BT25 410 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 NTMT1Q9BV86 223 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 VAPAQ9P0L0 249 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 V9GYQ6 96 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 RNF103-CHMP3A0A140T963 221 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 LOC730098B7Z3J9 87 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 H3BSA7 217 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 EPORP19235 508 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 LHCGRP22888 699 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 CDH15P55291 814 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 PLIN5Q00G26 463 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 B3GNT6Q6ZMB0 384 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 TRIM46Q7Z4K8 759 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 MPP4Q96JB8 637 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 KLQ9UEF7 1012 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 ZNF639Q9UID6 485 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 TBX21Q9UL17 535 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 ANGPTL3Q9Y5C1 460 aa17.23■□□□□ 0.35
USH1C-205ENST00000527020 PTPRSQ13332 1948 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 TGM5O43548 720 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 RGS14O43566 566 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 DFNA5O60443 496 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 LAG3P18627 525 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 PTSQ03393 145 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 ZXDCQ2QGD7 858 aaPredicted RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 TPRG1Q6ZUI0 275 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 HM13Q8TCT9 377 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 SCRN2Q96FV2 425 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 ZNF583Q96ND8 569 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 CHID1Q9BWS9 393 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 SMG9Q9H0W8 520 aaKnown RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 ABCG8Q9H221 673 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 CLK4Q9HAZ1 481 aaKnown RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 TRPS1Q9UHF7 1281 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 MBD1Q9UIS9 605 aaPredicted RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 MAGEL2Q9UJ55 1249 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 MAFFQ9ULX9 164 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 ZNF510Q9Y2H8 683 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 PPIL1Q9Y3C6 166 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 CCDC160A6NGH7 325 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 SLC28A1O00337 649 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 MANBAO00462 879 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 WDR47O94967 919 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 EBLN1P0CF75 366 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 C7P10643 843 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 HLA-FP30511 346 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 NSG1P42857 185 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 DYNC1I2Q13409 638 aaKnown RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 SMU1Q2TAY7 513 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 ATP13A5Q4VNC0 1218 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 METTL2BQ6P1Q9 378 aaKnown RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 TBPL2Q6SJ96 375 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 SUSD1Q6UWL2 747 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 METTL3Q86U44 580 aaKnown RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 RGL4Q8IZJ4 473 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 CMTM8Q8IZV2 173 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 OR8J3Q8NGG0 315 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 GTF2H4Q92759 462 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 USP7Q93009 1102 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 NSMCE2Q96MF7 247 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 TOX2Q96NM4 488 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 ZDHHC3Q9NYG2 299 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 ZNF490Q9ULM2 529 aaPredicted RBP17.22■□□□□ 0.35
USH1C-205ENST00000527020 SLC8A2Q9UPR5 921 aa17.22■□□□□ 0.35
USH1C-205ENST00000527020 TRIM64A6NGJ6 449 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 TRIM64CA6NLI5 447 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 LEFTY2O00292 366 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 LDLRP01130 860 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 CDH1P12830 882 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 CDH2P19022 906 aaPredicted RBP17.21■□□□□ 0.35
USH1C-205ENST00000527020 CCR7P32248 378 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 PTPN5P54829 565 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 TUBA4AP68366 448 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 KCTD21Q4G0X4 260 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 C22orf39Q6P5X5 142 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 MSRB3Q8IXL7 192 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 LIX1Q8N485 282 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 TRIML2Q8N7C3 387 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 SLC13A3Q8WWT9 602 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 FBXL20Q96IG2 436 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 MCCC1Q96RQ3 725 aaPredicted RBP17.21■□□□□ 0.35
USH1C-205ENST00000527020 NTN4Q9HB63 628 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 ZFP14Q9HCL3 533 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 C8orf4Q9NR00 106 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms