RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 NTHL1P78549 312 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 PIGFQ07326 219 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 LCN8Q6JVE9 175 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CXorf57Q6NSI4 855 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 GPR141Q7Z602 305 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 STK32CQ86UX6 486 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 AQP12AQ8IXF9 295 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 PHACTR4Q8IZ21 702 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CMTM8Q8IZV2 173 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 ZUFSPQ96AP4 578 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 TCEAL4Q96EI5 215 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 ADGRE3Q9BY15 652 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 POLR1BQ9H9Y6 1135 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 LATS2Q9NRM7 1088 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 KLQ9UEF7 1012 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 LEF1Q9UJU2 399 aaPredicted RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 PKP3Q9Y446 797 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 U3KQV3 271 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 ANKRD36A6QL64 1941 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 NOBOXO60393 691 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 MATN4O95460 622 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CD160O95971 181 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 LDLRP01130 860 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 PENKP01210 267 aaPredicted RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CLTBP09497 229 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CR2P20023 1033 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 VARSP26640 1264 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 TTPAP49638 278 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 ERVK-8P63133 956 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 RING1Q06587 406 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 ARHGEF6Q15052 776 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 PHKG1Q16816 387 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CYP20A1Q6UW02 462 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 ANKRD46Q86W74 232 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CLEC4FQ8N1N0 589 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 DTWD1Q8N5C7 304 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 DHRSXQ8N5I4 330 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 GFM2Q969S9 779 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 HSPBAP1Q96EW2 488 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 MRPL17Q9NRX2 175 aaKnown RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 CIDEBQ9UHD4 219 aa11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 NUP214P35658 2090 aaPredicted RBP11.76□□□□□ -0.53
CHMP1B-201ENST00000526991 PRAMEF1O95521 474 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 MLYCDO95822 493 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TCF3P15923 654 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 RFC2P35250 354 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 RPS9P46781 194 aaKnown RBP11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 BNIP2Q12982 314 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 PRKG2Q13237 762 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 PMS2P3Q13401 168 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 PRMT9Q6P2P2 845 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TMEM26Q6ZUK4 368 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SERPINA9Q86WD7 417 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 PDZD8Q8NEN9 1154 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 OR10A6Q8NH74 314 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ING5Q8WYH8 240 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 C9orf16Q9BUW7 83 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 NDEL1Q9GZM8 345 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ADNPQ9H2P0 1102 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 MTG2Q9H4K7 406 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ASB8Q9H765 288 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SMURF2Q9HAU4 748 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ZDHHC4Q9NPG8 344 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ELOVL2Q9NXB9 296 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SLC8A2Q9UPR5 921 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 A0A0C4DFX4 3053 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 C1orf232A0A0U1RR37 186 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TRIM64CA6NLI5 447 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 OR7A17O14581 309 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SH3BGRLO75368 114 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 CLDN11O75508 207 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SLC25A14O95258 325 aaPredicted RBP11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 CLDN7O95471 211 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TFPTP0C1Z6 253 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 PRKACGP22612 351 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 PABPC1LQ4VXU2 614 aaKnown RBP11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ENPP6Q6UWR7 440 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 SPATA19Q7Z5L4 167 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 MUS81Q96NY9 551 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TMEM175Q9BSA9 504 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 ACTL8Q9H568 366 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 IKZF5Q9H5V7 419 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 CARS2Q9HA77 564 aaKnown RBP11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 VAPAQ9P0L0 249 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 VPS51Q9UID3 782 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 TCRBV5S2A0A599 114 aa11.75□□□□□ -0.53
CHMP1B-201ENST00000526991 FGF18O76093 207 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms