RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZC3HC1Q86WB0 502 aaKnown RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 TMPRSS12Q86WS5 348 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 ZBTB2Q8N680 514 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 PHC3Q8NDX5 983 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 NDNQ99608 321 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 SLC30A3Q99726 388 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 MCMBPQ9BTE3 642 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CDC42EP4Q9H3Q1 356 aaKnown RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 KCNK4Q9NYG8 393 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 CORO1CQ9ULV4 474 aaPredicted RBP12.62□□□□□ -0.39
SMPD1-202ENST00000526280 WASF3Q9UPY6 502 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 DHRS7Q9Y394 339 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 COLEC10Q9Y6Z7 277 aa12.62□□□□□ -0.39
SMPD1-202ENST00000526280 VPS26AO75436 327 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 TCEA3O75764 348 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 MT-CO3P00414 261 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 FAM153BP0C7A2 387 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 CD9P21926 228 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 ATP5DP30049 168 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 PHBP35232 272 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 SKIV2L2P42285 1042 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 CDKN2DP55273 166 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 CLDN6P56747 220 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 GPLD1P80108 840 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 ILF2Q12905 390 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 FOXC1Q12948 553 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 SPIDRQ14159 915 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 KRT33BQ14525 404 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 AMZ1Q400G9 498 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 FAM153CQ494X1 144 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 NKAIN2Q5VXU1 208 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 GALNT15Q8N3T1 639 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 SIDT2Q8NBJ9 832 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 GIMAP7Q8NHV1 300 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 HNRNPLLQ8WVV9 542 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 INPP5DQ92835 1189 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 FERD3LQ96RJ6 166 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 GFM1Q96RP9 751 aaKnown RBP12.61□□□□□ -0.39
SMPD1-202ENST00000526280 GPR21Q99679 349 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 CPNE1Q99829 537 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 TBC1D10AQ9BXI6 508 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 FUT8Q9BYC5 575 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 RHOJQ9H4E5 214 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 EPB41L1Q9H4G0 881 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 KIR3DX1Q9H7L2 352 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 MVB12BQ9H7P6 319 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 TAS2R13Q9NYV9 303 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 ASF1AQ9Y294 204 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 VWA7Q9Y334 891 aa12.61□□□□□ -0.39
SMPD1-202ENST00000526280 PTPRBP23467 1997 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 HYAL3O43820 417 aaPredicted RBP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 ERLIN1O75477 346 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 ACSL3O95573 720 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 TOP3BO95985 862 aaKnown RBP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 MYBL2P10244 700 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 CFHR1Q03591 330 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 ABRQ12979 859 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 NAB1Q13506 487 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 TTLL9Q3SXZ7 439 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 ACSBG2Q5FVE4 666 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 HECTD2Q5U5R9 776 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 FAM45BPQ6NSW5 357 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 UGT3A1Q6NUS8 523 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 CCNI2Q6ZMN8 369 aaPredicted RBP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 RBM44Q6ZP01 1051 aaKnown RBP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 USP53Q70EK8 1073 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 CTAGE3PQ8IX95 158 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 TBC1D21Q8IYX1 336 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 PPM1NQ8N819 430 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 DCBLD1Q8N8Z6 715 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 GPATCH11Q8N954 259 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 OR10G6Q8NH81 332 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 OR5K2Q8NHB8 316 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 FAM45AQ8TCE6 357 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 CD200R1Q8TD46 325 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 AHCYL2Q96HN2 611 aaKnown RBP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 TXLNGYQ9BZA5 131 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 SYNDIG1Q9H7V2 258 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 TXNDC16Q9P2K2 825 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 ATXN7L1Q9ULK2 861 aaPredicted RBP12.6□□□□□ -0.39
SMPD1-202ENST00000526280 CLCA2Q9UQC9 943 aa12.6□□□□□ -0.39
SMPD1-202ENST00000526280 COL27A1Q8IZC6 1860 aaPredicted RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 D6RAR5 112 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 DUX1O43812 170 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 UBXN7O94888 489 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 MATN4O95460 622 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 CPNE6O95741 557 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 CBSLP0DN79 551 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 JUPP14923 745 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 FDXRP22570 491 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms