RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZNF626Q68DY1 528 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 PLEKHA7Q6IQ23 1121 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 CES5AQ6NT32 575 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 CCDC144NLQ6NUI1 221 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 ANKRD54Q6NXT1 300 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DNAJC24Q6P3W2 148 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 C1orf122Q6ZSJ8 110 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 Q7L0L9 218 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SLC26A9Q7LBE3 791 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SCD5Q86SK9 330 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 TADA2BQ86TJ2 420 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DEFB106AQ8N104 65 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 RNF10Q8N5U6 811 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 LEMD2Q8NC56 503 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 STKLD1Q8NE28 680 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 CMASQ8NFW8 434 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 VN1R2Q8NFZ6 395 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 OSR1Q8TAX0 266 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 CLEC4CQ8WTT0 213 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 RXFP2Q8WXD0 754 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SMG7Q92540 1137 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 MRPS31Q92665 395 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 FBXO32Q969P5 355 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 PSMG2Q969U7 264 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 FAM149B1Q96BN6 582 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 PABPC5Q96DU9 382 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 DDX23Q9BUQ8 820 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 TRIM62Q9BVG3 475 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 NUP85Q9BW27 656 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SLC29A3Q9BZD2 475 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 TSGA10Q9BZW7 698 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SFXN1Q9H9B4 322 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 NMUR1Q9HB89 426 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 POPDC2Q9HBU9 364 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 LZTFL1Q9NQ48 299 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 ASAH2Q9NR71 780 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 ASNSD1Q9NWL6 643 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 HCFC1R1Q9NWW0 138 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 TRMT1Q9NXH9 659 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.55□□□□□ -1.68
USP48-211ENST00000526044 UVRAGQ9P2Y5 699 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SLC39A10Q9ULF5 831 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 PYCARDQ9ULZ3 195 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 TFR2Q9UP52 801 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 NAALADL1Q9UQQ1 740 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DTNAQ9Y4J8 743 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 MYO9BQ13459 2157 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 PATJQ8NI35 1801 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DENND4CQ5VZ89 1909 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 ANAPC1Q9H1A4 1944 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 PDE4DIPQ5VU43 2346 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MACROD2A1Z1Q3 448 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 GOLGA6L9A6NEM1 432 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 C2CD4BA6NLJ0 364 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 TTC34A8MYJ7 566 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 KCNU1A8MYU2 1149 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 M0QYT0 321 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 BUB1O43683 1085 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 GLP2RO95838 553 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 F9P00740 461 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 ZDHHC11BP0C7U3 371 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 FOSL2P15408 326 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 PSMA2P25787 234 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 CDC25CP30307 473 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 SDC4P31431 198 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 ATP5C1P36542 298 aaKnown RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 MATKP42679 507 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MTHFRP42898 656 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 PGFP49763 221 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 RPL7AP62424 266 aaKnown RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 RAE1P78406 368 aaKnown RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 PIGHQ14442 188 aaPredicted RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 KRT72Q14CN4 511 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 SLC25A52Q3SY17 297 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 CCDC14Q49A88 953 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 DCAF6Q58WW2 860 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 C10orf120Q5SQS8 335 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 SYPL2Q5VXT5 272 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MORN5Q5VZ52 161 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 RSRC2Q7L4I2 434 aaKnown RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 OR8H2Q8N162 312 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 CCAR2Q8N163 923 aaKnown RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 EMC1Q8N766 993 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 JOSD2Q8TAC2 188 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 ZNF564Q8TBZ8 553 aaPredicted RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 KIAA1524Q8TCG1 905 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 RFFLQ8WZ73 363 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MUL1Q969V5 352 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 ZNF707Q96C28 371 aaPredicted RBP4.54□□□□□ -1.68
USP48-211ENST00000526044 ARHGEF26Q96DR7 871 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 GUCD1Q96NT3 240 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 MCEEQ96PE7 176 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 GCNAQ96QF7 691 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 CYP2S1Q96SQ9 504 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 CNPY3Q9BT09 278 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 PRSS22Q9GZN4 317 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 NACA2Q9H009 215 aa4.54□□□□□ -1.68
USP48-211ENST00000526044 NUAK2Q9H093 628 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms