RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 MT-ND3P03897 115 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 POLR2CP19387 275 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-204ENST00000525207 PDHA2P29803 388 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 NSG1P42857 185 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 PREPP48147 710 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 CD151P48509 253 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 ARL4DP49703 201 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 ACVR1Q04771 509 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 ABRQ12979 859 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 PRKAA1Q13131 559 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 DNASE1L3Q13609 305 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 KRT33BQ14525 404 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 SIX1Q15475 284 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-204ENST00000525207 GPR19Q15760 415 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 C16orf46Q6P387 395 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 AFTPHQ6ULP2 937 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 TAS2R42Q7RTR8 314 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 BPHLQ86WA6 291 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-204ENST00000525207 DNAAF3Q8N9W5 541 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 GLIS1Q8NBF1 620 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 OR4E2Q8NGC2 313 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 OR52E1Q8NGJ3 308 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 OR8K5Q8NH50 307 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 CT55Q8WUE5 264 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 C1orf54Q8WWF1 131 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 LCN9Q8WX39 176 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.18□□□□□ -0.94
SF3B2-204ENST00000525207 ZNF501Q96CX3 271 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-204ENST00000525207 RANBP9Q96S59 729 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 TLR10Q9BXR5 811 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 PITPNM3Q9BZ71 974 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 TRIM4Q9C037 500 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 SRMSQ9H3Y6 488 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 C1GALT1Q9NS00 363 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 SOHLH2Q9NX45 425 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 SMARCAL1Q9NZC9 954 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 KCND3Q9UK17 655 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 RIMKLBQ9ULI2 386 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 PRSS21Q9Y6M0 314 aa9.18□□□□□ -0.94
SF3B2-204ENST00000525207 ASH1LQ9NR48 2969 aaKnown RBP9.18□□□□□ -0.94
SF3B2-204ENST00000525207 CCDC162PA2VCL2 907 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 E7EVH7 732 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 BTN3A3O00478 584 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 SCRG1O75711 98 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 FURINP09958 794 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 MSL3P1P0C860 447 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 CDH3P22223 829 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 GRIA1P42261 906 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 LAMB3Q13751 1172 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 BOP1Q14137 746 aaKnown RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 SKIDA1Q1XH10 827 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 DEFB109BQ30KR1 87 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 TMTC4Q5T4D3 741 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 TSTD2Q5T7W7 516 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 MEI1Q5TIA1 1274 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ZNF449Q6P9G9 518 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 FBXO38Q6PIJ6 1188 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 PPP1R21Q6ZMI0 780 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ZNF517Q6ZMY9 492 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ATG14Q6ZNE5 492 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 PRUNE1Q86TP1 453 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 TMEM126BQ8IUX1 230 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 CCDC89Q8N998 374 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 C9orf43Q8TAL5 461 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 APOBEC4Q8WW27 367 aaKnown RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ELMO1Q92556 727 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 TFGQ92734 400 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 PEX13Q92968 403 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ALS2CR12Q96Q35 445 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 FERD3LQ96RJ6 166 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 RUFY1Q96T51 708 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 NRTNQ99748 197 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ACTL8Q9H568 366 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 TFB2MQ9H5Q4 396 aaKnown RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 MVB12BQ9H7P6 319 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 FANCEQ9HB96 536 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 CASS4Q9NQ75 786 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 EIF2B3Q9NR50 452 aaKnown RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 RAB6BQ9NRW1 208 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 PAK5Q9P286 719 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 SLC2A6Q9UGQ3 507 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 PADI1Q9ULC6 663 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ICKQ9UPZ9 632 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 ZNF148Q9UQR1 794 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 POLHQ9Y253 713 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 TCAF1Q9Y4C2 921 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 PCDHB3Q9Y5E6 796 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 KCNMB2Q9Y691 235 aa9.17□□□□□ -0.94
SF3B2-204ENST00000525207 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
SF3B2-204ENST00000525207 SEC16AO15027 2179 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 PCM1Q15154 2024 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 SLC5A10A0PJK1 596 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 SLC9B1P1A6NJY1 282 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 C2orf74A8MZ97 194 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 KATNA1O75449 491 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 CREG1O75629 220 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 GAS8O95995 478 aa9.16□□□□□ -0.94
SF3B2-204ENST00000525207 GOT2P00505 430 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms