RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 METRNLQ641Q3 311 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 GFRALQ6UXV0 394 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 CFAP206Q8IYR0 622 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF655Q8N720 491 aaPredicted RBP11.26□□□□□ -0.61
SDCBP-211ENST00000523441 PHC3Q8NDX5 983 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 OR1N1Q8NGS0 311 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 PTERQ96BW5 349 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 CCDC120Q96HB5 630 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 RBM41Q96IZ5 413 aaKnown RBP11.26□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF830Q96NB3 372 aaPredicted RBP11.26□□□□□ -0.61
SDCBP-211ENST00000523441 AGAP4Q96P64 663 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 TSGA13Q96PP4 275 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 AMACRQ9UHK6 382 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 CNTRLQ7Z7A1 2325 aa11.26□□□□□ -0.61
SDCBP-211ENST00000523441 MTORP42345 2549 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 AGPSO00116 658 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 IGHEP01854 428 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 UMODP07911 640 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 UQCRHP07919 91 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 HBQ1P09105 142 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 SPAM1P38567 509 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 HADHAP40939 763 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 TSFMP43897 325 aaKnown RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 DCDP81605 110 aaKnown RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 TMPRSS15P98073 1019 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 DMPKQ09013 629 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 AIMP2Q13155 320 aaKnown RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 ART3Q13508 389 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 LDLRAP1Q5SW96 308 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 PRAMEF13Q5VWM6 474 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF385CQ66K41 422 aaPredicted RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 E4F1Q66K89 784 aaPredicted RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 OR2Y1Q8NGV0 311 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 BLOC1S5Q8TDH9 187 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 PPP4R1Q8TF05 950 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 TRIM11Q96F44 468 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 THOC3Q96J01 351 aaKnown RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 DPH2Q9BQC3 489 aaPredicted RBP11.25□□□□□ -0.61
SDCBP-211ENST00000523441 DHRS4Q9BTZ2 278 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 THAP2Q9H0W7 228 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 EPS8L2Q9H6S3 715 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 FAM60AQ9NP50 221 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 IL26Q9NPH9 171 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 IP6K2Q9UHH9 426 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 COLEC10Q9Y6Z7 277 aa11.25□□□□□ -0.61
SDCBP-211ENST00000523441 SNRNP200O75643 2136 aaKnown RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 GLYATL1P3A0A0U1RQE8 302 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 KCNJ13O60928 360 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 MYBL1P10243 752 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 MX2P20592 715 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 PTGER4P35408 488 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 CHRNA4P43681 627 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 KLHL30Q0D2K2 578 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 HADHQ16836 314 aaKnown RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 LONRF2Q1L5Z9 754 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 NKAIN1Q4KMZ8 207 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 NPNTQ6UXI9 565 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 CDH24Q86UP0 819 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 METTL27Q8N6F8 245 aaPredicted RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 PQLC3Q8N755 202 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 BCORP1Q8N888 145 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 HDAC11Q96DB2 347 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 IMP4Q96G21 291 aaKnown RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 ERGIC2Q96RQ1 377 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 C17orf62Q9BQA9 187 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 HGH1Q9BTY7 390 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 TRIM8Q9BZR9 551 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 SOX17Q9H6I2 414 aaPredicted RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 SYTL2Q9HCH5 934 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 PLA2G3Q9NZ20 509 aa11.24□□□□□ -0.61
SDCBP-211ENST00000523441 NFKBIL1Q9UBC1 381 aaPredicted RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 LIMA1Q9UHB6 759 aaKnown RBP11.24□□□□□ -0.61
SDCBP-211ENST00000523441 MGAT4DA6NG13 374 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 PRICKLE3O43900 615 aaPredicted RBP11.23□□□□□ -0.61
SDCBP-211ENST00000523441 UNC5CO95185 931 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 NDST3O95803 873 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 GZMAP12544 262 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 NDUFS1P28331 727 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 ARSEP51690 589 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 DYNLT1P63172 113 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 ARG2P78540 354 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 OTUD4Q01804 1114 aaKnown RBP11.23□□□□□ -0.61
SDCBP-211ENST00000523441 TLR1Q15399 786 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 TMEM207Q6UWW9 146 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 BNC2Q6ZN30 1099 aaPredicted RBP11.23□□□□□ -0.61
SDCBP-211ENST00000523441 GLT6D1Q7Z4J2 308 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 PRSS58Q8IYP2 241 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 C19orf47Q8N9M1 422 aaKnown RBP11.23□□□□□ -0.61
SDCBP-211ENST00000523441 ACVR1CQ8NER5 493 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 OR52E1Q8NGJ3 308 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 SLX1AQ9BQ83 275 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 AP1M1Q9BXS5 423 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 CHST11Q9NPF2 352 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 ACTR10Q9NZ32 417 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 ACSL5Q9ULC5 683 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 KLF2Q9Y5W3 355 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms