RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MAFFQ9ULX9 164 aa15.95■□□□□ 0.14
USP42-207ENST00000521713 GPR32O75388 356 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 MTRF1O75570 445 aaKnown RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 LYPLA1O75608 230 aaPredicted RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 LRATO95237 230 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 HLA-DQB2P05538 268 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 RB1P06400 928 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TYRP14679 529 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 ZNF37AP17032 561 aaPredicted RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 SLC6A2P23975 617 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 KIR3DL1P43629 444 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TM4SF4P48230 202 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 GATMP50440 423 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SCN1BQ07699 218 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SATL1Q86VE3 508 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 BADQ92934 168 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TMCO6Q96DC7 493 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 ZSCAN5AQ9BUG6 496 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 LMAN2LQ9H0V9 348 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 EHD1Q9H4M9 534 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 IFT80Q9P2H3 777 aaPredicted RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 LRRC14BA6NHZ5 514 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 HOXD13P35453 343 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 HSPA7P48741 367 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TUBA3CQ13748 450 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TSC22D1Q15714 1073 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SLC1A5Q15758 541 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 HTRA1Q92743 480 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 CENPNQ96H22 339 aaPredicted RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 PNPOQ9NVS9 261 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SLC25A12O75746 678 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 H6PDO95479 791 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 ZNF30P17039 623 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 CLCQ05315 142 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 ITPRIPL2Q3MIP1 535 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 ZC3H3Q8IXZ2 948 aaKnown RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 CPNE9Q8IYJ1 553 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SLC22A18Q96BI1 424 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TAMM41Q96BW9 452 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 YTHDF1Q9BYJ9 559 aaKnown RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 OR2AG1Q9H205 316 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SRMSQ9H3Y6 488 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 RETREG1Q9H6L5 497 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TMED5Q9Y3A6 229 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 BACE2Q9Y5Z0 518 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 A0A1W2PRG6 482 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 LEFTY2O00292 366 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TIGD2Q4W5G0 525 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 RBM20Q5T481 1227 aaKnown RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 C6orf52Q5T4I8 152 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TUBA3EQ6PEY2 450 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 CXXC5Q7LFL8 322 aaKnown RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 KRT77Q7Z794 578 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 ADGRG2Q8IZP9 1017 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 TRPV1Q8NER1 839 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 PACSIN3Q9UKS6 424 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 SAMD4AQ9UPU9 718 aaKnown RBP15.94■□□□□ 0.14
USP42-207ENST00000521713 PCDHGA11Q9Y5H2 935 aa15.94■□□□□ 0.14
USP42-207ENST00000521713 FAM155BO75949 473 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 GNAZP19086 355 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CHIT1Q13231 466 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 MYLK3Q32MK0 819 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 INAVAQ3KP66 663 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 MS4A13Q5J8X5 152 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 TAS1R3Q7RTX0 852 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 SMG8Q8ND04 991 aaKnown RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 ADAMTS15Q8TE58 950 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 SFXN1Q9H9B4 322 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 ZDHHC3Q9NYG2 299 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 SAMHD1Q9Y3Z3 626 aaKnown RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 MYL9P24844 172 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 ACTR1BP42025 376 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 RPS9P46781 194 aaKnown RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 ACTR3P61158 418 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 ACTR1AP61163 376 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 STXBP1P61764 594 aaKnown RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 SERINC3Q13530 473 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 FASTKD3Q14CZ7 662 aaKnown RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 PAFAH1B3Q15102 231 aaKnown RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 FAAH2Q6GMR7 532 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CIB1Q99828 191 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 BTBD1Q9H0C5 482 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CD320Q9NPF0 282 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 FAM240BA0A1B0GVZ2 78 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 TIPRLO75663 272 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 TCEA3O75764 348 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 METTL18O95568 372 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 S100A6P06703 90 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CDH5P33151 784 aaPredicted RBP15.93■□□□□ 0.14
USP42-207ENST00000521713 GDF10P55107 478 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 ADGRE1Q14246 886 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 P2RY8Q86VZ1 359 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 UNC5BQ8IZJ1 945 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 OR4A15Q8NGL6 344 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 C12orf66Q96MD2 445 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 CITED4Q96RK1 184 aa15.93■□□□□ 0.14
USP42-207ENST00000521713 SNX7Q9UNH6 387 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms