RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ANKRD20A8PQ5CZ79 823 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ANKRD20A2Q5SQ80 823 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ANKRD20A1Q5TYW2 823 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ANKRD20A3Q5VUR7 823 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 TATDN1Q6P1N9 297 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 GBP6Q6ZN66 633 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMEM182Q6ZP80 229 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 MSANTD1Q6ZTZ1 278 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMPRSS11FQ6ZWK6 438 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 FJX1Q86VR8 437 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ODF3L1Q8IXM7 274 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC4A11Q8NBS3 891 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ATAD1Q8NBU5 361 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC38A5Q8WUX1 472 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ASB5Q8WWX0 329 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 RAD54LQ92698 747 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ST6GALNAC6Q969X2 333 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 OTUB1Q96FW1 271 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 RMDN2Q96LZ7 410 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 PARK7Q99497 189 aaKnown RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 PI4K2AQ9BTU6 479 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 DNAI2Q9GZS0 605 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF350Q9GZX5 532 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 CSTL1Q9H114 145 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ACKR4Q9NPB9 350 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 POT1Q9NUX5 634 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 COQ3Q9NZJ6 369 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 CNIH4Q9P003 139 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 POLLQ9UGP5 575 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC24A2Q9UI40 661 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 PCDHA7Q9UN72 937 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 SNX9Q9Y5X1 595 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 EIF4G1Q04637 1599 aaKnown RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 LINC01553A4QN01 128 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 PRR32B1ATL7 298 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMEM178BH3BS89 294 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 CLDN4O14493 209 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 AP5Z1O43299 807 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 STX6O43752 255 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 GPR137BO60478 399 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 SELENOFO60613 162 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 KINO60870 393 aaKnown RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 WDR1O75083 606 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 HOXC6P09630 235 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 C21orf33P30042 268 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 PTGER4P35408 488 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 KCNJ1P48048 391 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 MMP15P51511 669 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 YBEYP58557 167 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 ISL1P61371 349 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 PDE1BQ01064 536 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 SCN1BQ07699 218 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 TNK1Q13470 666 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 PTK6Q13882 451 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF234Q14588 700 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 RRS1Q15050 365 aaKnown RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 CDO1Q16878 200 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 SYT14P1Q58G82 188 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 XKR9Q5GH70 373 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 EFHC1Q5JVL4 640 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 PXDC1Q5TGL8 231 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 TRNP1Q6NT89 227 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 NOTUMQ6P988 496 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 ANKRD33Q7Z3H0 272 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 TLK2Q86UE8 772 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 GPR180Q86V85 440 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 MFN1Q8IWA4 741 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 TIGD4Q8IY51 512 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 CCDC170Q8IYT3 715 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 NUP93Q8N1F7 819 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 CPSF7Q8N684 471 aaKnown RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 NHLRC2Q8NBF2 726 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 NSMAFQ92636 917 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 DHX58Q96C10 678 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 C3orf30Q96M34 536 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 CCDC114Q96M63 670 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF778Q96MU6 729 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF48Q96MX3 618 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 INPP5KQ9BT40 448 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 LMF2Q9BU23 707 aaKnown RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 VN1R1Q9GZP7 353 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 Q9H8V8 135 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 TCP11L1Q9NUJ3 509 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 SMARCAL1Q9NZC9 954 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 B3GAT1Q9P2W7 334 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 LEF1Q9UJU2 399 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 DLGAP4Q9Y2H0 992 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 PADI2Q9Y2J8 665 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 OR2W1Q9Y3N9 320 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 RB1CC1Q8TDY2 1594 aa3.28□□□□□ -1.88
HMGN1P28-201ENST00000521340 SCRIBQ14160 1630 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 CGNL1Q0VF96 1302 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PCDH11YQ9BZA8 1340 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 OOEPA6NGQ2 149 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 C4orf47A7E2U8 309 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC16A5O15375 505 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ATP6AP2O75787 350 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 ACSL3O95573 720 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PMS2P2O95744 297 aa3.27□□□□□ -1.89
HMGN1P28-201ENST00000521340 PLA2G4BP0C869 781 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms