RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 KATNB1Q9BVA0 655 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 MYNNQ9NPC7 610 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 OSER1Q9NX31 292 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 MIOSQ9NXC5 875 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 PCDHA7Q9UN72 937 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 PDS5AQ29RF7 1337 aaKnown RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 MED19A0JLT2 244 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 NEMP2A6NFY4 417 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 C5orf52A6NGY3 159 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 PRR32B1ATL7 298 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 CAMTA2O94983 1202 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 PRSS2P07478 247 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 SAGP10523 405 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 MYOD1P15172 320 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 GM2AP17900 193 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 GNAZP19086 355 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 CD22P20273 847 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 ACAT1P24752 427 aaKnown RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 CDC25AP30304 524 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 HNF4AP41235 474 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 PCYT1AP49585 367 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 ALDH3A2P51648 485 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 NFATC4Q14934 902 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 RRS1Q15050 365 aaKnown RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 SPOUT1Q5T280 376 aaKnown RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 PLBD1Q6P4A8 553 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 C15orf39Q6ZRI6 1047 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 DGLUCYQ7Z3D6 616 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 DSG4Q86SJ6 1040 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMPRSS12Q86WS5 348 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 ADHFE1Q8IWW8 467 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 GBGT1Q8N5D6 347 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 C10orf53Q8N6V4 93 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 DNASE1L2Q92874 299 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMEM19Q96HH6 336 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 SLITRK6Q9H5Y7 841 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 RETREG1Q9H6L5 497 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 TBC1D7Q9P0N9 293 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 ARMCX3Q9UH62 379 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 KCNK7Q9Y2U2 307 aa5.08□□□□□ -1.6
HMGB1P46-201ENST00000520062 RPGRIP1LQ68CZ1 1315 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 DNAJC9-AS1A6NH13 148 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNHIT1O43257 154 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 GCNT3O95395 438 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 MOCS3O95396 460 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 IGHV2-70P01814 119 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CRYABP02511 175 aaKnown RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 H1F0P07305 194 aaKnown RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CSN3P07498 182 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 PLA2G4BP0C869 781 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CSF2RAP15509 400 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 MPZP25189 248 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 SLC6A6P31641 620 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 GNL1P36915 607 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CRKLP46109 303 aaKnown RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 AMPHP49418 695 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 MLLT10P55197 1068 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 EGR4Q05215 589 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 MYBPHQ13203 477 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 SMU1Q2TAY7 513 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 GLRA4Q5JXX5 417 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 NOTUMQ6P988 496 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 RHBDF2Q6PJF5 856 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 ENPP7Q6UWV6 458 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 GFRALQ6UXV0 394 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 ASB18Q6ZVZ8 466 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 RAPH1Q70E73 1250 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 HOOK3Q86VS8 718 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 DZIP1Q86YF9 867 aaKnown RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 KLHL7Q8IXQ5 586 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 C4orf19Q8IY42 314 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CARNMT1Q8N4J0 409 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 NHLRC2Q8NBF2 726 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 OR5M8Q8NGP6 311 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 SLC20A1Q8WUM9 679 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 SEMA4DQ92854 862 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 DAZLQ92904 295 aaKnown RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 PHF21BQ96EK2 531 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CDCA5Q96FF9 252 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 CCDC43Q96MW1 224 aaKnown RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 MMADHCQ9H3L0 296 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 IL1RAPL2Q9NP60 686 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 ADPRHL2Q9NX46 363 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 DLGAP4Q9Y2H0 992 aa5.07□□□□□ -1.6
HMGB1P46-201ENST00000520062 SMTNL1A8MU46 457 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 EIF3DO15371 548 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 AP5Z1O43299 807 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 WDR1O75083 606 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 LDB3O75112 727 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 PMS2P2O95744 297 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 EEF2P13639 858 aaKnown RBP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 TIA1P31483 386 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 SOAT1P35610 550 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 MMP15P51511 669 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 MAPK12P53778 367 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 DLK1P80370 383 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 UBXN1Q04323 297 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 CUL3Q13618 768 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 GTF2H2Q13888 395 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms