RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 NOMO2Q5JPE7 1267 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 CEP78Q5JTW2 689 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ACSM2BQ68CK6 577 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 KCTD11Q693B1 232 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 UTS2BQ765I0 119 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 EIF3MQ7L2H7 374 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 PEX13Q92968 403 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 LGALS12Q96DT0 336 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 OTUB1Q96FW1 271 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 NEK6Q9HC98 313 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 INTS7Q9NVH2 962 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 DUS2Q9NX74 493 aaKnown RBP6.56□□□□□ -1.36
CPNE3-203ENST00000517490 GALPQ9UBC7 116 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SNX7Q9UNH6 387 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 SSR3Q9UNL2 185 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 RNF6Q9Y252 685 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 ARFGEF1Q9Y6D6 1849 aa6.56□□□□□ -1.36
CPNE3-203ENST00000517490 GNG14A0A1W2PPG7 69 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PER2O15055 1255 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 XPNPEP2O43895 674 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PTTG1O95997 202 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ESR1P03372 595 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RPLP2P05387 115 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PABPC1P11940 636 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CYP2A7P20853 494 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PTX3P26022 381 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CD47Q08722 323 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ZC3H12BQ5HYM0 836 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 AGAP7PQ5VUJ5 663 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MSANTD2Q6P1R3 559 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TMPRSS11AQ6ZMR5 421 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ZFAND4Q86XD8 727 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CLHC1Q8NHS4 586 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 C9orf43Q8TAL5 461 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 AP3S1Q92572 193 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CRELD1Q96HD1 420 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 BTN2A3PQ96KV6 586 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ACBD6Q9BR61 282 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 DSN1Q9H410 356 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TRIM45Q9H8W5 580 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PLAC1Q9HBJ0 212 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 POLE4Q9NR33 117 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 EXD2Q9NVH0 621 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ING3Q9NXR8 418 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ERVK-18Q9QC07 812 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHB8Q9UN66 801 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ADAMTS5Q9UNA0 930 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PTGDR2Q9Y5Y4 395 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 USP3Q9Y6I4 520 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TFECO14948 347 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 NUAK1O60285 661 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MRPS14O60783 128 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TSC22D2O75157 780 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 POMCP01189 267 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TSPAN19P0C672 248 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 G6PDP11413 515 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 C4BPBP20851 252 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 FDXRP22570 491 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PRKACGP22612 351 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SLC15A1P46059 708 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 STC1P52823 247 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CLCA4Q14CN2 919 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SLC39A12Q504Y0 691 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 NOL9Q5SY16 702 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 LYPLAL1Q5VWZ2 237 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 KIAA1841Q6NSI8 718 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 KLHL17Q6TDP4 642 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SZRD1Q7Z422 152 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RETREG3Q86VR2 466 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SLC38A4Q969I6 547 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SLCO4A1Q96BD0 722 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PHF21AQ96BD5 680 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 NSUN5Q96P11 429 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 VPS35Q96QK1 796 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MAGIXQ9H6Y5 334 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TM9SF3Q9HD45 589 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 AASDHPPTQ9NRN7 309 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SACM1LQ9NTJ5 587 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ABCD2Q9UBJ2 740 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 GSTK1Q9Y2Q3 226 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHGA11Q9Y5H2 935 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ARL5AQ9Y689 179 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ADAMDEC1O15204 470 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MPZL2O60487 215 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CCNDBP1O95273 360 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MYL12AP19105 171 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 OR1G1P47890 313 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ALDH7A1P49419 539 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RABGGTBP53611 331 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CDKN2DP55273 166 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SPIBQ01892 262 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CPSF6Q16630 551 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PYDC2Q56P42 97 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 KIAA1614Q5VZ46 1190 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PIWIL3Q7Z3Z3 882 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 C11orf96Q7Z7L8 435 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TMEM130Q8N3G9 435 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SIDT2Q8NBJ9 832 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms