RNA–Protein interactions for RNA: ENST00000517183.1

SCARNA11.2-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 154 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.2-201ENST00000517183 OR10G7Q8NGN6 311 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 OR1J1Q8NGS3 322 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 OR4C3Q8NH37 302 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TDRD7Q8NHU6 1098 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HUS1BQ8NHY5 278 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 C9orf43Q8TAL5 461 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HMGCLL1Q8TB92 370 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 UTP15Q8TED0 518 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SETD7Q8WTS6 366 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 NOC3LQ8WTT2 800 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SMAP2Q8WU79 429 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 GATAD1Q8WUU5 269 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ZCCHC13Q8WW36 166 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SRSF12Q8WXF0 261 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 RAB40AQ8WXH6 277 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CNOT9Q92600 299 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 FRAT1Q92837 279 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 APBB2Q92870 758 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SLCO4A1Q96BD0 722 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 DHX58Q96C10 678 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 EID2BQ96D98 161 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 KTI12Q96EK9 354 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ATXN7L3BQ96GX2 97 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MASTLQ96GX5 879 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 GRAMD2BQ96HH9 432 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MAGEB18Q96M61 343 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HARBI1Q96MB7 349 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MYADMQ96S97 322 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 EYA3Q99504 573 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HNRNPABQ99729 332 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 NKX3-1Q99801 234 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MAPKAP1Q9BPZ7 522 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 OVOL2Q9BRP0 275 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 RTKNQ9BST9 563 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SARGQ9BW04 601 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 STRA6Q9BX79 667 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TDRD1Q9BXT4 1180 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HELZ2Q9BYK8 2649 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TMEM39BQ9GZU3 492 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CTDSP1Q9GZU7 261 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HOXD1Q9GZZ0 328 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 BRD8Q9H0E9 1235 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 FAM49AQ9H0Q0 323 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CDH19Q9H159 772 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CPVLQ9H3G5 476 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MAGIXQ9H6Y5 334 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ELAC1Q9H777 363 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MTHFD2LQ9H903 347 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 PLEKHA3Q9HB20 300 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ACKR4Q9NPB9 350 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MYNNQ9NPC7 610 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 INPP5EQ9NRR6 644 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 HOMER2Q9NSB8 354 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MAN2C1Q9NTJ4 1040 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ACSS1Q9NUB1 689 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 NECAP2Q9NVZ3 263 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 WSB2Q9NYS7 404 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 PTTG2Q9NZH5 202 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 OR6C2Q9NZP2 312 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ARHGAP23Q9P227 1491 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 RCC2Q9P258 522 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 THAP10Q9P2Z0 257 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 Q9UF83 564 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CLEC4EQ9ULY5 219 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 KMT2BQ9UMN6 2715 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SUFUQ9UMX1 484 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CORO2BQ9UQ03 480 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 PA2G4Q9UQ80 394 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 FAM96BQ9Y3D0 163 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 LSM4Q9Y4Z0 139 aaKnown RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TMEM184BQ9Y519 407 aaPredicted RBP0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CEP83Q9Y592 693 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 CAPN7Q9Y6W3 813 aa0□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 KMT2DO14686 5537 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TNRQ92752 1358 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 GOLGA6L10A0A0M3HER8 536 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 IQCMA0A1B0GVH7 501 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 A0A1W2PR80 420 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 A0A1W2PRB8 838 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 MED19A0JLT2 244 aaPredicted RBP-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 PABPN1LA6NDY0 278 aaKnown RBP-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 GOLGA6L3A6NEY3 463 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 EPOPA6NHQ4 379 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 PHGR1C9JFL3 82 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 J3QKU1 62 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 K7EQD1 137 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 M0QZ24 198 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 KPNA5O15131 536 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 PMM2O15305 246 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SEC14L5O43304 696 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TXNL1O43396 289 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SNAI2O43623 268 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 ASNA1O43681 348 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 SCO2O43819 266 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 TMCC2O75069 709 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 GLRA3O75311 464 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 AVILO75366 819 aa-0.01□□□□□ -2.41
SCARNA11.2-201ENST00000517183 STAM2O75886 525 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms