RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 DUX4L5P0CJ88 424 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DUX4L6P0CJ89 424 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DUX4L7P0CJ90 424 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 BRAFP15056 766 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 NCLP19338 710 aaKnown RBP-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 NR2F2P24468 414 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 LMO2P25791 158 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 HSPA4P34932 840 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 MATKP42679 507 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 MTNR1AP48039 350 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 LHX1P48742 406 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 CDKN1CP49918 316 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 CCR5P51681 352 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 RAD23BP54727 409 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 GUCY2DQ02846 1103 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 RBL2Q08999 1139 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 GSG1Q2KHT4 349 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 C2orf68Q2NKX9 166 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC45A4Q5BKX6 768 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 NHLRC3Q5JS37 347 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DUX4L9Q6RFH8 374 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 Q75L30 129 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 CHMP1BQ7LBR1 199 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC46A3Q7Z3Q1 461 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SESTD1Q86VW0 696 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF695Q8IW36 515 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SPATA6LQ8N4H0 392 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 GBGT1Q8N5D6 347 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 NGEFQ8N5V2 710 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SETD9Q8NE22 299 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 CSGALNACT1Q8TDX6 532 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 TMEM170AQ8WVE7 144 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 RUNDC3BQ96NL0 473 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SGK2Q9HBY8 427 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 PDE11AQ9HCR9 933 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 TMEM9Q9P0T7 183 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DUX4Q9UBX2 424 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 KLQ9UEF7 1012 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 RSPH14Q9UHP6 348 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 RAB23Q9ULC3 237 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 PPP2R2CQ9Y2T4 447 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 PCDHA10Q9Y5I2 948 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 NAV3Q8IVL0 2385 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SEC16AO15027 2179 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 C17orf113A0A1B0GUU1 675 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC38A8A6NNN8 435 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 ANKRD66B4E2M5 251 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SYN3O14994 580 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 RPP40O75818 363 aaKnown RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 MTA2O94776 668 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SERPINC1P01008 464 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SRGAP2BP0DMP2 458 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 CYP4B1P13584 511 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 LHCGRP22888 699 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 HTR1BP28222 390 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 TSFMP43897 325 aaKnown RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 MMP15P51511 669 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 NDUFV3P56181 108 aaKnown RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 FKBP3Q00688 224 aaKnown RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 NAAAQ02083 359 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 RNASELQ05823 741 aaKnown RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 FOXD4Q12950 439 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 ITGA7Q13683 1181 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 CYLC2Q14093 348 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 IGFBP7Q16270 282 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 CNGA2Q16280 664 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 LINC00483Q53H64 154 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SGO1Q5FBB7 561 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF667Q5HYK9 610 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 NDUFAF5Q5TEU4 345 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 CYB5R2Q6BCY4 276 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 LCLAT1Q6UWP7 414 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 GPR180Q86V85 440 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 NIPA2Q8N8Q9 360 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 HSD17B8Q92506 261 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 ORAI1Q96D31 301 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 EGLN2Q96KS0 407 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SNX22Q96L94 193 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 FAM218AQ96MZ4 157 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 TWNKQ96RR1 684 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 OSBPL11Q9BXB4 747 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 PITPNM3Q9BZ71 974 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 C22orf23Q9BZE7 217 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 PCDHAC1Q9H158 963 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 GLT8D2Q9H1C3 349 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC32A1Q9H598 525 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SEBOXQ9HB31 216 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 SMYD2Q9NRG4 433 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF391Q9UJN7 358 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 FBXL2Q9UKC9 423 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 TPCN1Q9ULQ1 816 aa-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 TTC7AQ9ULT0 858 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 NUP214P35658 2090 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-542P-201ENST00000516405 PHLDB1Q86UU1 1377 aa-1.06□□□□□ -2.58
RNU6-542P-201ENST00000516405 CCDC189A1A4V9 331 aa-1.06□□□□□ -2.58
RNU6-542P-201ENST00000516405 CBY3A6NI87 242 aa-1.06□□□□□ -2.58
RNU6-542P-201ENST00000516405 KIF28PB7ZC32 967 aa-1.06□□□□□ -2.58
RNU6-542P-201ENST00000516405 KLK10O43240 276 aa-1.06□□□□□ -2.58
RNU6-542P-201ENST00000516405 SCO2O43819 266 aa-1.06□□□□□ -2.58
RNU6-542P-201ENST00000516405 HEXIM1O94992 359 aaKnown RBP-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms