RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 LCKP06239 509 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 PRKACAP17612 351 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 GADD45AP24522 165 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 LIPAP38571 399 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 MLLT6P55198 1093 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 FOXA1P55317 472 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 SCAPQ12770 1279 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 TNK1Q13470 666 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 DGLUCYQ7Z3D6 616 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 OR10T2Q8NGX3 314 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 RHEBL1Q8TAI7 183 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ANKRD49Q8WVL7 239 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 FAM162AQ96A26 154 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 NPY6RQ99463 290 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 SDHCQ99643 169 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 CARS2Q9HA77 564 aaKnown RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF556Q9HAH1 456 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ABI2Q9NYB9 513 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 UBP1Q9NZI7 540 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 FNDC1Q4ZHG4 1894 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 A0A0X1KG70 313 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 SEC22BO75396 215 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF254O75437 659 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 F9P00740 461 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 CAPN1P07384 714 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 NPR1P16066 1061 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 STAT5BP51692 787 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 FAPQ12884 760 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 GBX1Q14549 363 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 TIGD6Q17RP2 521 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ATP6AP1LQ52LC2 224 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 XKR7Q5GH72 579 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ARHGAP36Q6ZRI8 547 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 UTS2BQ765I0 119 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 HDDC2Q7Z4H3 204 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ABI1Q8IZP0 508 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 MYDGFQ969H8 173 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 PYCR2Q96C36 320 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 RHBDF1Q96CC6 855 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 METTL2AQ96IZ6 378 aaKnown RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF599Q96NL3 588 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 STOML2Q9UJZ1 356 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 NDRG4Q9ULP0 352 aaKnown RBP12.6□□□□□ -0.39
SMAD1-215ENST00000515385 PKP3Q9Y446 797 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 A8MV72 311 aaPredicted RBP12.59□□□□□ -0.39
SMAD1-215ENST00000515385 INO80B-WBP1J3KQ70 363 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 AP3D1O14617 1153 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 SLC7A4O43246 635 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 SSX4O60224 188 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 ALPPP05187 535 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 GSTM1P09488 218 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 UROSP10746 265 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 PRKACGP22612 351 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 HLA-DMAP28067 261 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 FMO4P31512 558 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 ADRA1BP35368 520 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 KCNC1P48547 511 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 OLR1P78380 273 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMAD1-215ENST00000515385 RIPPLY1Q0D2K3 151 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 KCTD2Q14681 263 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 NKG7Q16617 165 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 GPR158Q5T848 1215 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 ANKRD34AQ69YU3 496 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 TMEM179BQ7Z7N9 219 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 PLPP6Q8IY26 295 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 ANKRD53Q8N9V6 530 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF548Q8NEK5 533 aaPredicted RBP12.59□□□□□ -0.39
SMAD1-215ENST00000515385 WNT8BQ93098 351 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 PPM1MQ96MI6 270 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 ROGDIQ9GZN7 287 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 SLC22A4Q9H015 551 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 DCAF13Q9NV06 445 aaKnown RBP12.59□□□□□ -0.39
SMAD1-215ENST00000515385 TNFRSF10DQ9UBN6 386 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 KLK4Q9Y5K2 254 aa12.59□□□□□ -0.39
SMAD1-215ENST00000515385 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.39
SMAD1-215ENST00000515385 IGKV6-21A0A0C4DH24 114 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 ELOVL7A1L3X0 281 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 M0R082 166 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 CD1DP15813 335 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 CD72P21854 359 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 CYP2C18P33260 490 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 RFX2P48378 723 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 LIMK1P53667 647 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 MTPNP58546 118 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 LAPTM5Q13571 262 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 SYT16Q17RD7 645 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 TIMM50Q3ZCQ8 353 aa12.58□□□□□ -0.39
SMAD1-215ENST00000515385 OTUD1Q5VV17 481 aaPredicted RBP12.58□□□□□ -0.39
SMAD1-215ENST00000515385 MLIPQ5VWP3 458 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms