RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 WDR5P61964 334 aaKnown RBP14.57□□□□□ -0.08
NUP54-217ENST00000514987 IMPG1Q17R60 797 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 C18orf21Q32NC0 220 aaPredicted RBP14.57□□□□□ -0.08
NUP54-217ENST00000514987 CARD16Q5EG05 197 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 LRRC66Q68CR7 880 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 SLC2A7Q6PXP3 512 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 DLEU7Q6UYE1 221 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 SPATA31D4Q6ZUB0 917 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 LRRC70Q7Z2Q7 622 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 IFNEQ86WN2 208 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 CBR4Q8N4T8 237 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 LEMD2Q8NC56 503 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 GPR26Q8NDV2 337 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 TTC16Q8NEE8 873 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 TSPAN14Q8NG11 270 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 NSMCE2Q96MF7 247 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 YME1L1Q96TA2 773 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 CGREF1Q99674 301 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 CRISPLD2Q9H0B8 497 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 SLC32A1Q9H598 525 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 ASAH2Q9NR71 780 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 ZMYM5Q9UJ78 669 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 SLC8A2Q9UPR5 921 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 DMTF1Q9Y222 760 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 ATP11BQ9Y2G3 1177 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 POLR3HQ9Y535 204 aaPredicted RBP14.57□□□□□ -0.08
NUP54-217ENST00000514987 RNF103-CHMP3A0A140T963 221 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SOBPA7XYQ1 873 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 H3BNH8 94 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 MANBAO00462 879 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SOCS2O14508 198 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 FGF18O76093 207 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CLDN9O95484 217 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 C8AP07357 584 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CDH1P12830 882 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CKMT2P17540 419 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 GKP32189 559 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 VEGFBP49765 207 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SP140Q13342 867 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 PHKG1Q16816 387 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 KCTD21Q4G0X4 260 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 RFTN2Q52LD8 501 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 RTL10Q7L3V2 364 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 TSPAN33Q86UF1 283 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 ZSWIM9Q86XI8 627 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 DCBLD1Q8N8Z6 715 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 USP7Q93009 1102 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 BIRC7Q96CA5 298 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 RMND5BQ96G75 393 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 CCDC115Q96NT0 180 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 BDH2Q9BUT1 245 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 OSBPL6Q9BZF3 934 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 ACTL8Q9H568 366 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 LRTM1Q9HBL6 345 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 RAD18Q9NS91 495 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 INTS7Q9NVH2 962 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 DUS2Q9NX74 493 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 TUBA8Q9NY65 449 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 PTTG2Q9NZH5 202 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 TSR3Q9UJK0 312 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 ZNF490Q9ULM2 529 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 CLEC4EQ9ULY5 219 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 HELZP42694 1942 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 A0A1W2PRU2 124 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SAC3D1A6NKF1 404 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 NUAK1O60285 661 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 HIST1H2AGP0C0S8 130 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 ZNF23P17027 643 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 ZNF30P17039 623 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 HIST1H2ADP20671 130 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 MYF6P23409 242 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CA5AP35218 305 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CA8P35219 290 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 RPL38P63173 70 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 PLOD1Q02809 727 aaPredicted RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 PTSQ03393 145 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 GK3PQ14409 553 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 KIAA0040Q15053 153 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SLC5A9Q2M3M2 681 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 GGTA1PQ4G0N0 100 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 PLEKHS1Q5SXH7 462 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 THEMIS2Q5TEJ8 643 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 GLYATQ6IB77 296 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 NEK10Q6ZWH5 1172 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CMTM8Q8IZV2 173 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 DIS3LQ8TF46 1054 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 SLC13A3Q8WWT9 602 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 HIST1H2AHQ96KK5 128 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 TMEM74Q96NL1 305 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 HIST1H2AJQ99878 128 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SH3GL3Q99963 347 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 H2AFJQ9BTM1 129 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SLC12A9Q9BXP2 914 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 SLC46A2Q9BY10 475 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 DPY30Q9C005 99 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 CLK4Q9HAZ1 481 aaKnown RBP14.56□□□□□ -0.08
NUP54-217ENST00000514987 PARVBQ9HBI1 364 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms