RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 MS4A12Q9NXJ0 267 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 KLRF1Q9NZS2 232 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 APOBEC3BQ9UH17 382 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 IKZF2Q9UKS7 526 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 BTRCQ9Y297 605 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CCDC162PA2VCL2 907 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 RGSL1A5PLK6 1076 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MAP2K7O14733 419 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 FESP07332 822 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 NR2F6P10588 404 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SLC26A3P40879 764 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PIK3CBP42338 1070 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ATP12AP54707 1039 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CRADDP78560 199 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DSG1Q02413 1049 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SERINC3Q13530 473 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MYBPC3Q14896 1274 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 FBXL22Q6P050 247 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ZNF662Q6ZS27 426 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 AMIGO1Q86WK6 493 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 OR5T3Q8NGG3 340 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 GPR151Q8TDV0 419 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 C10orf88Q9H8K7 445 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PLEKHA1Q9HB21 404 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ZNF282Q9UDV7 671 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 POLR3HQ9Y535 204 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 PCDHGB1Q9Y5G3 927 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 ELOA3DA6NLF2 546 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 H0YC42 278 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 GATBO75879 557 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 MED26O95402 600 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SAGP10523 405 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 FBLP22087 321 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 ADSLP30566 484 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 CTBP2P56545 445 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TAS2R40P59535 323 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ABATP80404 500 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PPIDQ08752 370 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 FUT2Q10981 343 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DHCR24Q15392 516 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ELOA3BQ3SY89 546 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 C10orf62Q5T681 223 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 BICRALQ6AI39 1079 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ELOA3Q8NG57 546 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SCAMP5Q8TAC9 235 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MDM1Q8TC05 714 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SLC22A8Q8TCC7 542 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 NDRG1Q92597 394 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 RNF31Q96EP0 1072 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 B3GALT6Q96L58 329 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 GFM1Q96RP9 751 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 CCDC28BQ9BUN5 200 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TDRD1Q9BXT4 1180 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 DEFB126Q9BYW3 111 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MUC13Q9H3R2 512 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CCSER2Q9H7U1 834 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 POLE3Q9NRF9 147 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PCDHB16Q9NRJ7 776 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 IFT80Q9P2H3 777 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 RGS17Q9UGC6 210 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 TFR2Q9UP52 801 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ERGIC3Q9Y282 383 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ROBO1Q9Y6N7 1651 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TGDSO95455 350 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SERPINA1P01009 418 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CALCAP01258 141 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MT-ND5P03915 603 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CYP17A1P05093 508 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ATXN1P54253 815 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 MRPS21P82921 87 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 SP140Q13342 867 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 HSF5Q4G112 596 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 KLHL12Q53G59 568 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SLC8B1Q6J4K2 584 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 LRRC70Q7Z2Q7 622 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MTDHQ86UE4 582 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 C11orf65Q8NCR3 313 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CEP76Q8TAP6 659 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 NKD2Q969F2 451 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 TMEM74Q96NL1 305 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ACSS3Q9H6R3 686 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DCLRE1BQ9H816 532 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 POLR3BQ9NW08 1133 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 FMN2Q9NZ56 1722 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 H0YJX3 145 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TRIM38O00635 465 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DCLK1O15075 740 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GSC2O15499 205 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZNF208O43345 1280 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CHST10O43529 356 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 FARS2O95363 451 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 GP1BBP13224 206 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GNALP38405 381 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 HSPA7P48741 367 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DNASE1L1P49184 302 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 SEPHS1P49903 392 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 KCNC3Q14003 757 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ELAVL3Q14576 367 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms