RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CYP1A2P05177 515 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 POLBP06746 335 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 SPAM1P38567 509 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 CHRNA4P43681 627 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 KCNK10P57789 538 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 MYL5Q02045 173 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 ART3Q13508 389 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 TESK1Q15569 626 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 ZIC1Q15915 447 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 KRTAP21-3Q3LHN1 58 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 MRPL14Q6P1L8 145 aaKnown RBP18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 NPNTQ6UXI9 565 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 GDF7Q7Z4P5 450 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 OR2L2Q8NH16 312 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 DNAJB14Q8TBM8 379 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 RAPGEF5Q92565 580 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 TRIM8Q9BZR9 551 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 DEF6Q9H4E7 631 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 ATP13A2Q9NQ11 1180 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 DHCR7Q9UBM7 475 aaKnown RBP18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 CACNA1CQ13936 2221 aa18.39■□□□□ 0.53
HMGCS1-206ENST00000511774 AP1B1Q10567 949 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 CDC16Q13042 620 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 PRKAA1Q13131 559 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 ZNF169Q14929 603 aaPredicted RBP18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 RHBDD2Q6NTF9 364 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 TRIM73Q86UV7 250 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 ZNF295-AS1Q8N0V1 137 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 ANKRD20A12PQ8NF67 263 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 DTX3LQ8TDB6 740 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 LCN9Q8WX39 176 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 RELTQ969Z4 430 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 CNDP1Q96KN2 507 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 RNF157Q96PX1 679 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 ZCCHC2Q9C0B9 1178 aaKnown RBP18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 SRMSQ9H3Y6 488 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 GLOD4Q9HC38 313 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 FBXL4Q9UKA2 621 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 ACSL5Q9ULC5 683 aa18.38■□□□□ 0.53
HMGCS1-206ENST00000511774 SPG11Q96JI7 2443 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 GLYATL1P3A0A0U1RQE8 302 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 A0A1B0GUH1 482 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 AGPSO00116 658 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 SLC35G4P0C7Q5 338 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 TDGF1P3P51864 188 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 KRTAP10-9P60411 292 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 AIMP2Q13155 320 aaKnown RBP18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 PDK2Q15119 407 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 SLC14A2Q15849 920 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 PPP2R5EQ16537 467 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 CYP2A13Q16696 494 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 HADHQ16836 314 aaKnown RBP18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 ZNF324BQ6AW86 544 aaPredicted RBP18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 KDELC1Q6UW63 502 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 ADGRF3Q8IZF5 1079 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 CATSPER1Q8NEC5 780 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 ACVR1CQ8NER5 493 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 PTERQ96BW5 349 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 MESP1Q9BRJ9 268 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 XKR8Q9H6D3 395 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 IFT80Q9P2H3 777 aaPredicted RBP18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 HEY1Q9Y5J3 304 aa18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 KLF2Q9Y5W3 355 aaPredicted RBP18.37■□□□□ 0.53
HMGCS1-206ENST00000511774 LOC285095A0A1B0GVY8 99 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 CCDC66A2RUB6 948 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 MYO1FO00160 1098 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 KLHL41O60662 606 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 JRKO75564 520 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 IGHEP01854 428 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 HBQ1P09105 142 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 ITGAXP20702 1163 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 CD68P34810 354 aaPredicted RBP18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 DCDP81605 110 aaKnown RBP18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 GSE1Q14687 1217 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 SIRPB2Q5JXA9 342 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 PRAMEF13Q5VWM6 474 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 RBM43Q6ZSC3 357 aaKnown RBP18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 MICALCLQ6ZW33 695 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 PHC3Q8NDX5 983 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 SMOXQ9NWM0 555 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 GPN3Q9UHW5 284 aaPredicted RBP18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 COLEC10Q9Y6Z7 277 aa18.36■□□□□ 0.53
HMGCS1-206ENST00000511774 NCOA6Q14686 2063 aaPredicted RBP18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 MATN2O00339 956 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 SOCS6O14544 535 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 OR2B3O76000 313 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 NDUFS1P28331 727 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 HTR1EP28566 365 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 AKT1P31749 480 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 PTGER4P35408 488 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 WNT3AP56704 352 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 TMPRSS15P98073 1019 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 SRSF11Q05519 484 aaKnown RBP18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 Q0VFX4 171 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 LONRF2Q1L5Z9 754 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 NKAIN1Q4KMZ8 207 aa18.35■□□□□ 0.53
HMGCS1-206ENST00000511774 CFAP206Q8IYR0 622 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms