RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 INO80DQ53TQ3 878 aaPredicted RBP14.65□□□□□ -0.06
USP38-202ENST00000510377 MS4A13Q5J8X5 152 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 RBM48Q5RL73 367 aaKnown RBP14.65□□□□□ -0.06
USP38-202ENST00000510377 ACSM2BQ68CK6 577 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 DENND5AQ6IQ26 1287 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 HACD2Q6Y1H2 254 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 ZNF598Q86UK7 904 aaKnown RBP14.65□□□□□ -0.06
USP38-202ENST00000510377 IGFN1Q86VF2 1251 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 UBASH3BQ8TF42 649 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 MAGEE1Q9HCI5 957 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 ERVK-18Q9QC07 812 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 VPS51Q9UID3 782 aa14.65□□□□□ -0.06
USP38-202ENST00000510377 PRRG1O14668 218 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 AIREO43918 545 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 MITFO75030 526 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 UGT2B4P06133 528 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ANXA5P08758 320 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 AKR1A1P14550 325 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 MAPK1P28482 360 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 IRF8Q02556 426 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 RFX4Q33E94 735 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 PARP15Q460N3 678 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 GTDC1Q4AE62 458 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ANKRD26P1Q6NSI1 321 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 PELI3Q8N2H9 469 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 KRTCAP2Q8N6L1 136 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 SOCS4Q8WXH5 440 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 IGSF8Q969P0 613 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ATG10Q9H0Y0 220 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 TREX1Q9NSU2 369 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 SHMT2P34897 504 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ATP6V1E1P36543 226 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 NKX2-5P52952 324 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 FOXM1Q08050 763 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 CD47Q08722 323 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 SLC13A2Q13183 592 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ZNF792Q3KQV3 632 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 PIK3R6Q5UE93 754 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 OR13J1Q8NGT2 312 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 TBC1D15Q8TC07 691 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 YTHDF1Q9BYJ9 559 aaKnown RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 SMOC2Q9H3U7 446 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 LTB4R2Q9NPC1 389 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 TMEM30AQ9NV96 361 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 BTBD3Q9Y2F9 522 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 PNMA8CA0A1B0GUJ8 204 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 EFCAB9A8MZ26 197 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 F8W810 466 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 CHRM5P08912 532 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 TMBIM6P55061 237 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 ADAM17P78536 824 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 VEPH1Q14D04 833 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 STK40Q8N2I9 435 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 MFSD2AQ8NA29 543 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 BRI3BPQ8WY22 251 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ZIM2Q9NZV7 527 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 CD300AQ9UGN4 299 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 CAB39Q9Y376 341 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 ZFP37Q9Y6Q3 630 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 UPK3BL1B0FP48 263 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 UPK3BL2E5RIL1 263 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 SLC28A1O00337 649 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ALOX5P09917 674 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 POLR2IP36954 125 aaKnown RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 SPDYE7PQ495Y7 208 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 ATXN7L2Q5T6C5 722 aaPredicted RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 OR5K1Q8NHB7 308 aa14.64□□□□□ -0.07
USP38-202ENST00000510377 MRM3Q9HC36 420 aaKnown RBP14.64□□□□□ -0.07
USP38-202ENST00000510377 DNAJC25-GNG10A0A024R161 153 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 LCHNA4D1U4 455 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 INSIG1O15503 277 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 FFAR2O15552 330 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 GPR39O43194 453 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 BCAS1O75363 584 aaPredicted RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 SCELO95171 688 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 SERPIND1P05546 499 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CHI3L1P36222 383 aaPredicted RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 FPGSQ05932 587 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 EPHX4Q8IUS5 362 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 MAELQ96JY0 434 aaKnown RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 TEX37Q96LM6 180 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CCSER2Q9H7U1 834 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 KAT8Q9H7Z6 458 aaKnown RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 FAM118AQ9NWS6 357 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 ADPRHL2Q9NX46 363 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 TESMINQ9Y4I5 508 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 SCN1AP35498 2009 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CCNKO75909 580 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CYP11A1P05108 521 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 TYMPP19971 482 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 NCS1P62166 190 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CES5AQ6NT32 575 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CLIP4Q8N3C7 705 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 RBM38Q9H0Z9 239 aaKnown RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 PCDHGA8Q9Y5G5 932 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms