RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 WIPF3A6NGB9 483 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 LDB2O43679 373 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 SPOPO43791 374 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 CDH3P22223 829 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 PSMB4P28070 264 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 VAV2P52735 878 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 TPM4P67936 248 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 TFDP3Q5H9I0 405 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 ZNF787Q6DD87 383 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 AADACL2Q6P093 401 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 BBS12Q6ZW61 710 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 KATNAL2Q8IYT4 538 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 EFCAB3Q8N7B9 438 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 OR52E1Q8NGJ3 308 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 OR8K5Q8NH50 307 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 FERD3LQ96RJ6 166 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 SMAD5Q99717 465 aaKnown RBP15.43■□□□□ 0.06
RAB40C-202ENST00000509637 SPRTNQ9H040 489 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-202ENST00000509637 COG4Q9H9E3 785 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 ZBTB20Q9HC78 741 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-202ENST00000509637 CASS4Q9NQ75 786 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 ERRFI1Q9UJM3 462 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-202ENST00000509637 SNX7Q9UNH6 387 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 PRSS21Q9Y6M0 314 aa15.43■□□□□ 0.06
RAB40C-202ENST00000509637 IGLV3-16A0A075B6K0 115 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 TRBV5-4A0A0C4DH59 114 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 CCDC66A2RUB6 948 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 GOLGA6L19H0YKK7 550 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 ZNF749O43361 778 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 PSTPIP1O43586 416 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 KLK3P07288 261 aaPredicted RBP15.42■□□□□ 0.06
RAB40C-202ENST00000509637 SLC35G4P0C7Q5 338 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 PREPP48147 710 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 HADHBP55084 474 aaKnown RBP15.42■□□□□ 0.06
RAB40C-202ENST00000509637 GSDMDP57764 484 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 PDE1BQ01064 536 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 TBX2Q13207 712 aaPredicted RBP15.42■□□□□ 0.06
RAB40C-202ENST00000509637 PRKG2Q13237 762 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 CYB5D1Q6P9G0 228 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 KLHDC8BQ8IXV7 354 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 PIANPQ8IYJ0 282 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 NXPE1Q8N323 547 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 CLDN19Q8N6F1 224 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 LMNTD1Q8N9Z9 388 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 ACVR1CQ8NER5 493 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 HM13Q8TCT9 377 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 CPT1BQ92523 772 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 SNRNP40Q96DI7 357 aaKnown RBP15.42■□□□□ 0.06
RAB40C-202ENST00000509637 CLIP3Q96DZ5 547 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 CCDC42Q96M95 316 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 VAT1Q99536 393 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 SRMSQ9H3Y6 488 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 ACTR5Q9H9F9 607 aaPredicted RBP15.42■□□□□ 0.06
RAB40C-202ENST00000509637 SPHK1Q9NYA1 384 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 TRHDEQ9UKU6 1024 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 NTNG1Q9Y2I2 539 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 ZNF451Q9Y4E5 1061 aa15.42■□□□□ 0.06
RAB40C-202ENST00000509637 DOCK10Q96BY6 2186 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 GSAPA4D1B5 854 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 RCCD1A6NED2 376 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ZRANB2O95218 330 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■■□□ 16.1
RAB40C-202ENST00000509637 CBX6O95503 412 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 MSL3P1P0C860 447 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ATP1B2P14415 290 aaPredicted RBP15.41■□□□□ 0.06
RAB40C-202ENST00000509637 BOP1Q14137 746 aaKnown RBP15.41■□□□□ 0.06
RAB40C-202ENST00000509637 GSE1Q14687 1217 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 NCF4Q15080 339 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 DEFB110Q30KQ9 67 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ANKRD20A2Q5SQ80 823 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 TMTC4Q5T4D3 741 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ANKRD20A1Q5TYW2 823 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ANKRD20A3Q5VUR7 823 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ARMC6Q6NXE6 501 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 NAPRTQ6XQN6 538 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 BZW1Q7L1Q6 419 aaKnown RBP15.41■□□□□ 0.06
RAB40C-202ENST00000509637 FAM20CQ8IXL6 584 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 RCOR2Q8IZ40 523 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 CARFQ8N187 725 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 CCDC110Q8TBZ0 833 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ACTL9Q8TC94 416 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 LCN9Q8WX39 176 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 SEC14L1Q92503 715 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 DNAJC1Q96KC8 554 aaKnown RBP15.41■□□□□ 0.06
RAB40C-202ENST00000509637 TFB2MQ9H5Q4 396 aaKnown RBP15.41■□□□□ 0.06
RAB40C-202ENST00000509637 SLC22A11Q9NSA0 550 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ASF1BQ9NVP2 202 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ACTR10Q9NZ32 417 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 INTUQ9ULD6 942 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 ICKQ9UPZ9 632 aa15.41■□□□□ 0.06
RAB40C-202ENST00000509637 C5orf60A6NFR6 353 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 HACD1B0YJ81 288 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 H7C0C1 242 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 NDUFS1P28331 727 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 PEBP1P30086 187 aaKnown RBP15.4■□□□□ 0.06
RAB40C-202ENST00000509637 ATP5OP48047 213 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 GEMP55040 296 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 OTUD4Q01804 1114 aaKnown RBP15.4■□□□□ 0.06
RAB40C-202ENST00000509637 C1orf189Q5VU69 101 aa15.4■□□□□ 0.06
RAB40C-202ENST00000509637 CISD2Q8N5K1 135 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms