RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	TAOK1	Q7L7X3	1001 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	TBC1D10C	Q8IV04	446 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	DCLK2	Q8N568	766 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	ESX1	Q8N693	406 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	TMEM105	Q8N8V8	129 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	POC1A	Q8NBT0	407 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	FIG4	Q92562	907 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	DYNLL2	Q96FJ2	89 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	SLC41A2	Q96JW4	573 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	NR1H4	Q96RI1	486 aa	Predicted RBP	4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	EPYC	Q99645	322 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	FAM110A	Q9BQ89	295 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	KXD1	Q9BQD3	176 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	EVA1A	Q9H8M9	152 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	TCP11L1	Q9NUJ3	509 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	MCM9	Q9NXL9	1143 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	NYAP2	Q9P242	653 aa		4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	SPTAN1	Q13813	2472 aa	Known RBP	4.01	□□□□□ -1.77
NFKB1-208	ENST00000509165	KDM3A	Q9Y4C1	1321 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	WDFY3	Q8IZQ1	3526 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	LAMA5	O15230	3695 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	C19orf81	C9J6K1	198 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	SEC31A	O94979	1220 aa	Known RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	IGKV3-20	P01619	116 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	UMOD	P07911	640 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	HOXB5	P09067	269 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	AKR1B1	P15121	316 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	DDX5	P17844	614 aa	Known RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	ABCD1	P33897	745 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	DDIT3	P35638	169 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	CCL23	P55773	120 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	BACE1	P56817	501 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	NLRP5	P59047	1200 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	NECTIN1	Q15223	517 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	FAM69A	Q5T7M9	428 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	INO80C	Q6PI98	192 aa	Predicted RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	CASC1	Q6TDU7	716 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	KRBA2	Q6ZNG9	492 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	C9orf139	Q6ZV77	190 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	STOX1	Q6ZVD7	989 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	TMEM179	Q6ZVK1	233 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	SLC46A3	Q7Z3Q1	461 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	ZNF329	Q86UD4	541 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	DSEL	Q8IZU8	1212 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	FBXL16	Q8N461	479 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	SPATA6L	Q8N4H0	392 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	OR2AK2	Q8NG84	335 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	NFKBID	Q8NI38	313 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	SECTM1	Q8WVN6	248 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	TMEM19	Q96HH6	336 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	INPP4A	Q96PE3	977 aa	Predicted RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	UPF3B	Q9BZI7	483 aa	Known RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	PAIP1	Q9H074	479 aa	Known RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	UPF2	Q9HAU5	1272 aa	Known RBP	4	□□□□□ -1.77
NFKB1-208	ENST00000509165	LRRC4	Q9HBW1	653 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	TCF7L2	Q9NQB0	619 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	MTUS1	Q9ULD2	1270 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	KCNS2	Q9ULS6	477 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	NAALADL1	Q9UQQ1	740 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	VDAC3	Q9Y277	283 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	CRYL1	Q9Y2S2	319 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	PSAT1	Q9Y617	370 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	ASXL3	Q9C0F0	2248 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	NID2	Q14112	1375 aa		4	□□□□□ -1.77
NFKB1-208	ENST00000509165	MYO9A	B2RTY4	2548 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	MYH6	P13533	1939 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	NEDD4	P46934	1319 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	WDR19	Q8NEZ3	1342 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	UBR5	O95071	2799 aa	Predicted RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165		A0A0G2JPF8	293 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	SLC15A5	A6NIM6	579 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	HNRNPCL3	B7ZW38	293 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	LINC01565	O15544	149 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	HNRNPCL1	O60812	293 aa	Known RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	REC8	O95072	547 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	GH2	P01242	217 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	CD4	P01730	458 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	HNRNPCL4	P0DMR1	293 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	HLA-DOB	P13765	273 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	DGKA	P23743	735 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	EPHA8	P29322	1005 aa	Predicted RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	CDA	P32320	146 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	CPOX	P36551	454 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	ARL1	P40616	181 aa	Predicted RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	GNAQ	P50148	359 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	FUT6	P51993	359 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	ZNF132	P52740	706 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	ACLY	P53396	1101 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	HNRNPH2	P55795	449 aa	Known RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	SLC20A2	Q08357	652 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	SIGLEC14	Q08ET2	396 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	GRB14	Q14449	540 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	FGFBP1	Q14512	234 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	SLC45A4	Q5BKX6	768 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	CWC27	Q6UX04	472 aa	Known RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	CCNI2	Q6ZMN8	369 aa	Predicted RBP	3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	FOXL2NB	Q6ZUU3	175 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	HEATR4	Q86WZ0	1026 aa		3.99	□□□□□ -1.77
NFKB1-208	ENST00000509165	SFR1	Q86XK3	245 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms