RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PCDH20Q8N6Y1 951 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 KLHDC9Q8NEP7 349 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 Q8NFD4 153 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 OR10V1Q8NGI7 309 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 OR8K5Q8NH50 307 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 GDAP1Q8TB36 358 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 ATOH8Q96SQ7 321 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 FERMT1Q9BQL6 677 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 GPATCH1Q9BRR8 931 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 POLR3CQ9BUI4 534 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 COPS7BQ9H9Q2 264 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 UPF2Q9HAU5 1272 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 C5AR2Q9P296 337 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 KCNK7Q9Y2U2 307 aa3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZFP37Q9Y6Q3 630 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-209ENST00000508304 PTPRCP08575 1304 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 FLT1P17948 1338 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 IGKV6D-41A0A0C4DH26 115 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 IFNL4K9M1U5 179 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 VCYO14598 125 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNHIT1O43257 154 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 TADA2AO75478 443 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 FTCDO95954 541 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 POLR2CP19387 275 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 DSCR10P59022 87 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 TAS2R38P59533 333 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 GRAPQ13588 217 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 SNAPC1Q16533 368 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 PCGF3Q3KNV8 242 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 CRY2Q49AN0 593 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 C6orf163Q5TEZ5 329 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 KRT39Q6A163 491 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 CAVIN1Q6NZI2 390 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 BRAT1Q6PJG6 821 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 SEPT14Q6ZU15 432 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ASB18Q6ZVZ8 466 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 GET4Q7L5D6 327 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 IQCHQ86VS3 1027 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 CCDC170Q8IYT3 715 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 HACE1Q8IYU2 909 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 RNF168Q8IYW5 571 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 SCYL3Q8IZE3 742 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 TSPAN14Q8NG11 270 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 OR14L1PQ8NHC6 308 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 TEKT4Q8WW24 435 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF622Q969S3 477 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 CCDC114Q96M63 670 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 CDRT15Q96T59 188 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ANKRD2Q9GZV1 360 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 DBNDD1Q9H9R9 158 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ACSS1Q9NUB1 689 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 CWC15Q9P013 229 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ABI3Q9P2A4 366 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 ANAPC2Q9UJX6 822 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 OR2W1Q9Y3N9 320 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 POMT1Q9Y6A1 747 aa3.98□□□□□ -1.77
TRAPPC13-209ENST00000508304 TCRBV21S2A2A0A5A6 115 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 C1orf226A1L170 272 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 H0YIN7 160 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 ADAMDEC1O15204 470 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 OGG1O15527 345 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 JRKO75564 520 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 BCL10O95999 233 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 PTMAP06454 111 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 MMP9P14780 707 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 PTAFRP25105 342 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 CALRP27797 417 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 HOXC9P31274 260 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 RAB28P51157 221 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 CCR3P51677 355 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 ARSEP51690 589 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 ISL1P61371 349 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 UBXN1Q04323 297 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 SCN1BQ07699 218 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 MAD2L1Q13257 205 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 SIRPB2Q5JXA9 342 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 KRT79Q5XKE5 535 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 OR7E24Q6IFN5 339 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 DCLRE1AQ6PJP8 1040 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF704Q6ZNC4 412 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 CLEC17AQ6ZS10 378 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 CAMKMTQ7Z624 323 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 HJURPQ8NCD3 748 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 THAP6Q8TBB0 222 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 TAAR8Q969N4 342 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 CCDC47Q96A33 483 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 HDAC11Q96DB2 347 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 RRNAD1Q96FB5 475 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 FER1L6-AS2Q96M78 137 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 CFAP57Q96MR6 1250 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 SEPT5Q99719 369 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 NAA11Q9BSU3 229 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 DNAJC18Q9H819 358 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 SLC7A10Q9NS82 523 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 COPG2Q9UBF2 871 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 TUBE1Q9UJT0 475 aa3.97□□□□□ -1.77
TRAPPC13-209ENST00000508304 FBXL2Q9UKC9 423 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms