RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DHRSXQ8N5I4 330 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC5A11Q8WWX8 675 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 HTR3CQ8WXA8 447 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 USP7Q93009 1102 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC45A3Q96JT2 553 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 TTLL2Q9BWV7 592 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 NUAK2Q9H093 628 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 ANKRD19PQ9H560 264 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 PRDM5Q9NQX1 630 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 VTI1BQ9UEU0 232 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 AFF4Q9UHB7 1163 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 SNX6Q9UNH7 406 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 PCDHGA7Q9Y5G6 932 aa10.65□□□□□ -0.7
PDLIM5-210ENST00000508216 A0A1B0GV90 55 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 KPNA3O00505 521 aaPredicted RBP10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 SCAMP1O15126 338 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 SEC14L5O43304 696 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 TGM5O43548 720 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 IFNA10P01566 189 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 IFIT1P09914 478 aaKnown RBP10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 ACSM4P0C7M7 580 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 NFKB1P19838 968 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 TNFAIP3P21580 790 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 CPN2P22792 545 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 CRHBPP24387 322 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 TM4SF4P48230 202 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 GALCP54803 685 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 HERVK_113P63132 956 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 EPS8Q12929 822 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 GRM1Q13255 1194 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 ASAH1Q13510 395 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 NFYCQ13952 458 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 UAP1L1Q3KQV9 507 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 DDI2Q5TDH0 399 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 OR5M10Q6IEU7 315 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 DENND5AQ6IQ26 1287 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 TRILQ7L0X0 811 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 PAGE2Q7Z2X7 111 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 ANKRD46Q86W74 232 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 NPAS4Q8IUM7 802 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 SVOPLQ8N434 492 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 YIPF7Q8N8F6 280 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 SLC35G2Q8TBE7 412 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 CREB3L4Q8TEY5 395 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 HLA-CQ95604 372 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 POM121Q96HA1 1249 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 CAMK1GQ96NX5 476 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 OR2A14Q96R47 310 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 SSX3Q99909 188 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 VRK1Q99986 396 aaPredicted RBP10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 GSX2Q9BZM3 304 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 ACSS3Q9H6R3 686 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 HEXA-AS1Q9H8Q6 139 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 IL21Q9HBE4 155 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 NIT2Q9NQR4 276 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 OPTCQ9UBM4 332 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 UBQLN2Q9UHD9 624 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 ADAM30Q9UKF2 790 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 KCNH4Q9UQ05 1017 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 TP53TG5Q9Y2B4 290 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 DHRS7Q9Y394 339 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 PEX16Q9Y5Y5 336 aa10.65□□□□□ -0.71
PDLIM5-210ENST00000508216 RREB1Q92766 1687 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 LAMB2P55268 1798 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 CLDN24A6NM45 220 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 KCNK1O00180 336 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 SOCS2O14508 198 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 RAD1O60671 282 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 STX11O75558 287 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 MBP02144 154 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 DNTTP04053 509 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 C2P06681 752 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 OGNP20774 298 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 HSD3B2P26439 372 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 MSX1P28360 303 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 CRABP1P29762 137 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 PPP3CCP48454 512 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 SERPINB9P50453 376 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 MS4A2Q01362 244 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 PDIA2Q13087 525 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 CBLBQ13191 982 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 ORC2Q13416 577 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 SERINC3Q13530 473 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 ALKBH1Q13686 389 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 CEACAM7Q14002 265 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 ZIK1Q3SY52 487 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 DACT2Q5SW24 774 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 DPY19L2P1Q6NXN4 242 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 PGAP1Q75T13 922 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 POLNQ7Z5Q5 900 aa10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 MCATQ8IVS2 390 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-210ENST00000508216 OR8H3Q8N146 312 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms